Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04423 ATGGCAAAGTTTCTGACACTCTCACTAATCATTTCAAACCTCCTCATTGGATTAGTGAATGCTGACTGGAACATATTGAACCAAAGATGGAGAAAAGGAGTAGTTGGAGCCAACTTGAAGAACTATTGTGAGAGTTGGAGGATCAATGTTGAACTAAACAACATTAGAAGGTTCAATGTTGTGCCTCAAGAATGTGTGGAGCATGTGAAAAAATACATGACTTCATCTCAATACAAGGCTGACTCTGAGAGGGCAGTGGAGGAGGTTAGGCTCTATTTGAGTGGGTGTTGCACTTTGAAAGGTGATGGCAAAGATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGCTGAATGCAAGTTCTTTAGAAGCATGGATGAAGGAAAGCAAGGCACCTGCTCTAGATCACACACTCGAACTCTTCCATGAAATCAAGAACAGAGGGATCAAAATCTTTCTGATTTCTTCAAGAAAAGAAAGCCTTAGATCTCACACTGTAGACAACCTTGTGAATGTTGGGTACCATGGATGGACTAGTCTTACATTGAGGGGTCTTGATGATGAATTGATGGAAGTGAAAAAGTACCATTCCAAGGTGAGGCAACAATTGGTTGATGAAGGTTACCGCATATGGGGCATTGTTGGAGATCAATGGAGCAGTTTTGAGGGGCTTCCAATTGCAAAGAGAACATTCAAATTACCGAATTCCATGTACTACATTGCATAA 771 0.406 MAKFLTLSLIISNLLIGLVNADWNILNQRWRKGVVGANLKNYCESWRINVELNNIRRFNVVPQECVEHVKKYMTSSQYKADSERAVEEVRLYLSGCCTLKGDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNASSLEAWMKESKAPALDHTLELFHEIKNRGIKIFLISSRKESLRSHTVDNLVNVGYHGWTSLTLRGLDDELMEVKKYHSKVRQQLVDEGYRIWGIVGDQWSSFEGLPIAKRTFKLPNSMYYIA. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04423 256 SUPERFAMILY HAD-like 98 243 IPR036412 -
Seca2g04423 256 Gene3D - 39 256 IPR023214 -
Seca2g04423 256 PIRSF VSP 1 256 IPR014403 -
Seca2g04423 256 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 32 255 - -
Seca2g04423 256 NCBIfam plant acid phosphatase 38 256 IPR010028 GO:0003993
Seca2g04423 256 FunFam Vegetative storage protein 1 39 256 - -
Seca2g04423 256 CDD HAD_VSP 69 255 - -
Seca2g04423 256 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 40 255 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04423 Seca-Chr2 129555777 129558963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04423 - - gmx:100785781 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04423 2 129555777 129558963 Seca2g04423 2 129555777 129558963 ECH