Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04414 ATGGCGAACAAACCACTGCTCTGCTTGTCCGTCCTCCTCGCCGTCTTCGCCGTTGCCGGAGCCTCCTCCGTCGACGGCGCCGAGCTTGACTACTCCAAACTCTCTGGCATTATAATCCCAGGCTTCGCCTCTACTCAGCTCCGAGCATGGTCTATTCTTGACTGTCCTTACTCTCCTCTGGATTTCAATCCTCTCGATTTGGTGTGGCTTGATACTACCAAACTTCTTTCTGCTGTGAATTGCTGGCTTAAGTGCATGGTACTGGATCCTTATAATCAGACAGATCATCCTGATTGCAAATCTCGTCCTGACAGTGGTCTTTCTGGTATCACAGAACTTGATCCTGGTTATATAACAGGACCTCTTTCATCGGTATGGAAAGAATGGATTAAATGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCTTATGATTGGAGATTGTCACCGTCCATGCTTGAAGAACGAGACCTTTACTTTCATAAGCTAAAATTGACATTTGAAACTGCTTTTAAGCTTCGAGGTGGTCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCACGTTTTTCGTTATTTTTTGGAGTGGCTGAAGTTAGAGATTGCACCAAAACATTATATCCAATGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTTTGGGTGCTACTGAAACCATCGAAGCAACGCTTTCAGGGTTCACATTTGGGCTTCCTATATCTGAGGGAACAGCTCGGTTGATGTTCAACTCCTTTGGTTCATCACTGTGGATGATGCCCTTTTCCAAGTACTGTAAAACTGATAATAAATATTGGAAGCATTTTTCTGGAGGAAGGCATGTAGGTCACAATACATATCAGTGTGATGAGCAGGAATTCCAGTCAAATTTTTCTGGATGGCCAACAAAGATAATCAACATTGAAATTCCCTCAACTCGAGGATATGATGCATATCCTTCATTTTCAGAAATACCTCAGGCCAACTTGTCCAACATGGAATGTGGACTACCTACTCAATTATCTTTCTCAGCTCGTGAAATAGCAGATGGCTCCTTTTTCAAGGCAATTGAAGATTATGACCCAGATAGCAATAGGCTTTTGTACCAGTTAGAGAAATCATATCTTGGTGATCCTGTTCTTAATCCACTTACACCTTGGGACCGGCCACCAATAAAAAATGTCTTCTGCATATATGGCACCGATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGCGGCAAGCCTTACCCTGATAACTGGATCATTACAGATGTCATTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGTCACAAGTGGTGATGAGACAGTACCATACCACTCCCTTTCCTGGTGCAAGAATTGGCTTGGACCAAAGGTGAACATAACAAGAGCTCCTCAGTCCGAGCATGATGGCTCAGATGTACAGATTAAATTGAATGTGGAACACCGCCATGAAGAAGATATTGCTCCAAACATGACAAGATCGCCTAGAGTTAAGTACATAACATATTATGAAGATTCTGACAGTCTTCCCGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCACCGGTGCTAATGAGAGAGTTATGGCTCGAGATGTGGCATGATATTCATCCTGATGCAAAATCAGAGTTTGTCACAAAAGCTAAGCGCGGACCTTTAAGAGATGAGGATTGTTACTGGGATTATGGAAAAGCACGTTGTGCATGGCCAGAATATTGTGAATATAGGTATGTTTTTGGTGATGTTCATTTGGGACAAAGCTGCAGGTTGAGATATACTTCAGCTGATTTGTTATTGCATTATGTGTAA 1899 0.4255 MANKPLLCLSVLLAVFAVAGASSVDGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEERDLYFHKLKLTFETAFKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGATETIEATLSGFTFGLPISEGTARLMFNSFGSSLWMMPFSKYCKTDNKYWKHFSGGRHVGHNTYQCDEQEFQSNFSGWPTKIINIEIPSTRGYDAYPSFSEIPQANLSNMECGLPTQLSFSAREIADGSFFKAIEDYDPDSNRLLYQLEKSYLGDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDVIYEFEGSLISRSGNLVEGNPGVTSGDETVPYHSLSWCKNWLGPKVNITRAPQSEHDGSDVQIKLNVEHRHEEDIAPNMTRSPRVKYITYYEDSDSLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPDAKSEFVTKAKRGPLRDEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLRYTSADLLLHYV. 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04414 632 Gene3D alpha/beta hydrolase 93 253 IPR029058 -
Seca2g04414 632 Pfam Lecithin:cholesterol acyltransferase 66 502 IPR003386 GO:0006629|GO:0008374
Seca2g04414 632 SUPERFAMILY alpha/beta-Hydrolases 166 487 IPR029058 -
Seca2g04414 632 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 33 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04414 Seca-Chr2 129408650 129421973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04414 9 632 Acyl Lipid Metabolism Gene Families AT1G04010 77.583 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04414 - - gmx:100806466 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04414 2 129408650 129421973 Seca2g04414 2 129408650 129421973 ECH