Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04409 ATGGATATGGAAGAAGAGAGATGCCATCCTCTGTTGACAGGAGGTAGAAGAAAAGAGAAAGGCTACAACCATAGATTATCAACCAGTCAGATGCATGTGATGGCTGCCATGTGTGAGACTCTCTTTCCTTCCCTGCCTTTGGATTCCCTAAACAAACAAAATTCAGAAGACCAAGCTCTCTCTGCCTTCTACAGAACCTCTGGTTCTCAATTCCCATTTCCTGATGAGGCTGCAGAGCTCTTGTTTAATAGGAGTATTCCAGAAGCGTTGTCGTTGGTGAGCTGGGTTCTGCTGATTCTGTCGTTCAGATTGGGGACACTGTTGCTTTGTGGAACCCTTTGCTTAAGCTGGAAGTGGCCTTTCATTCACAAATTCTCTGAGATTTCCTTGGAGAAGAGAGAAGAAATTCTCAAGAATTGGTCAAGGGAAAACCGTTGGATACCTCTACGGATTGTGTTTGTGCTGATCAAACTTGTCTGCTTCTATACTCTGTTCTCAAGGGCTGATGCAAATGGGCATAATCCCATATGGAAAGCAATAGGGTACCATGTGGACACTAGGGAAAAGTTGACACGTAAGGAGAGGCCCCTCCAAGAGGGAATAGTAGAGACTATGTACGAAACTGATTCTACTTTAATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATCCAGAACAGAACATATACAAGATCAAATGTGATGTTGTAATTGTTGGTTCTGGTTGTGGTGGAGGAGTTGCAGCTGCTGTTCTTGCAAACTCTGGTCAGAAAGTGGTTGTCCTAGAGAAAGGAGAGTATTTTGTTTCCAATGATTATTCTTCCCTTGAAGGTCCATCCATGAATGAGCTATATGAATCAGGTGGACTCATGCCAAGTCTTGATGGGAAGATGATCATCTTAGCTGGCTCAACAGTTGGTGGAGGCTCTGCTGTAAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTAAAGGAGTGGTCTCAAAAATATAAAATCCCTTTTTTTGCAAGCCCTGAATATCAATCTGCCATGGACACAGTTTGCAAAAGGATTGGTGTGACAGAGAAATGCAATCATGAAAGCTTTCAAAATCAAGTTCTTAGACAAGGATGTGAGAAAATTGGCCAAAAAGTTGAGTCAGTTGCAATAAATTCTTCAGCAGATCACTATTGTGGCTCATGCTGTTATGGTTGTAGAACAGGAGATAAAAAGGGAACTGACACTACTTGGTTGGTTGATGCTGTGAGCAATGGTGCAGTGATCCTCACTGGATGTAAAGCTGAGAAATTCATACTGAAAGATGGAATGAATGGAATGAAGAAAAAGACATGCTTAGGAGTGATTGCTGCTGCAACTAGGAGGAGCAAGGTAACAAAGAAACTCCAAATTGAATCCAAGGTAACCATTTCAGCATGTGGCTCTCTCTCCACACCTCCTTTAATGATTTCTAGTGGGCTGAAAAATCCAAACATTGGAAGGAACCTCCATCTCCACCCTGTTCAATTTGCTTGGGGGTACTTCCCTGAAGACATGACAAACTTGAGTGGTAATAACTATGAGGGAGGAATCATAACTTCAATCCACAAGGTATTTGCAGAGGATTCCACCCCAAGATTCATCATAGAAGCACCTGCTCTAGGACCTGGATCATTTTCAGCGTTGGTTCCTTGGGTGTCAGGTCTTGATGCAAAAGACAGGATGGCAAAGTATGCAAGAACAGCTAACCTTTTTGCATTGATAAGAGACAAAGGATCAGGAGAAGTAAAGGCTGAAGGCAGGGTTTCTTACAGACTTGACCAAATGGACAAAGAAAGTCTTAAAATTGGACTAAGGAAAGCCTTGAGGATTTTGGTTGCAGCAGGAGCTGTAGAAGTGGGTACTTACAGGAGTGATGGCCAAAGAATCAAATGTAAAGGGATCAAGGAGGAAGATTTGGATGAGTTTATAGACACTGTCACCATACCTGGGGGTCCAAGGTCAAGGAGTGAATTCTGGACTGTATTTACTACTGCACATCAGATGGCAAGTTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCACTTGATGAGAATGCAGAGAGTTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGAAGCGTTTTACCCTCTGCAGTTGGTGTCAACCCCATGGTAACCATCGAATCTACATCATACTGTATTGCCAGTAAAATTGCAGAATCACTGAAGAGAGAAAACCAGCATGGATAA 2241 0.4293 MDMEEERCHPLLTGGRRKEKGYNHRLSTSQMHVMAAMCETLFPSLPLDSLNKQNSEDQALSAFYRTSGSQFPFPDEAAELLFNRSIPEALSLVSWVLLILSFRLGTLLLCGTLCLSWKWPFIHKFSEISLEKREEILKNWSRENRWIPLRIVFVLIKLVCFYTLFSRADANGHNPIWKAIGYHVDTREKLTRKERPLQEGIVETMYETDSTLIQSLTEKGLEVTEDPEQNIYKIKCDVVIVGSGCGGGVAAAVLANSGQKVVVLEKGEYFVSNDYSSLEGPSMNELYESGGLMPSLDGKMIILAGSTVGGGSAVNWSACIRTPDSVLKEWSQKYKIPFFASPEYQSAMDTVCKRIGVTEKCNHESFQNQVLRQGCEKIGQKVESVAINSSADHYCGSCCYGCRTGDKKGTDTTWLVDAVSNGAVILTGCKAEKFILKDGMNGMKKKTCLGVIAAATRRSKVTKKLQIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNLSGNNYEGGIITSIHKVFAEDSTPRFIIEAPALGPGSFSALVPWVSGLDAKDRMAKYARTANLFALIRDKGSGEVKAEGRVSYRLDQMDKESLKIGLRKALRILVAAGAVEVGTYRSDGQRIKCKGIKEEDLDEFIDTVTIPGGPRSRSEFWTVFTTAHQMASCRMGATEEEGALDENAESWEAKGLYVCDGSVLPSAVGVNPMVTIESTSYCIASKIAESLKRENQHG. 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04409 746 PIRSF Lg_Ch_AO 13 745 IPR012400 GO:0046577
Seca2g04409 746 Gene3D - 222 530 IPR036188 -
Seca2g04409 746 Pfam GMC oxidoreductase 597 725 IPR007867 GO:0016614
Seca2g04409 746 Gene3D - 668 746 IPR036188 -
Seca2g04409 746 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 22 744 - -
Seca2g04409 746 Pfam GMC oxidoreductase 237 504 IPR000172 GO:0016614|GO:0050660
Seca2g04409 746 SUPERFAMILY FAD/NAD(P)-binding domain 234 741 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04409 Seca-Chr2 129312949 129317112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04409 7 744 Acyl Lipid Metabolism Gene Families AT4G28570 57.620 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04409 K17756 - gmx:100808951 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04409 2 129312949 129317112 Seca2g04409 2 129312949 129317112 ECH