Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04390 ATGGGTTCTCTGCCTGCATTTCCTTTAGGCCTTTCTCCCAAACAAGGCGTTAACACTCACATTGACCAAACCACCCTCGCCGACCTCTTCAAAGCACAGCAAAACCATCTCAACTTCTTCTTCGACCACATCGACCATTCCCAAACCCTAGCCTTCACCAACGCCCTCCTCGACACCGCCGGCACCGTCTTCTTCACCGGCGTCGGCAAATCCGGCTTCGTCGCTAACAAGATCTCTCAGACACTCGTCTCCCTCGGTGTCCGTTCCGCCTTCCTCTCTCCCGTCGACGCTCTCCACGGCGACATCGGAATCCTCGGCGATCGCGATGTCCTCGTCCTCCTCAGCAAGTCTGGCGCCACTGAGGAGCTCCTCCGCCTTGTGCCATGCGCCAGGGCCAAGGGAGCGCGCCTCATCGCCGTCACCTCTGTCGAAGGTAGCGCTCTGTCAGCGGTGTGCGACATGAACGTGCATTTGCCGTTGGAGAGGGAGCTTTGCCCTTTCAACCTTGCTCCGGTCACTTCCACTGCCATCCAGATGGTTTTCGGTGACACCGTCGCCATCGCGCTTATGGCTGCAAGGAATCTCACCAAGGACGAGTATGCCGCCAACCATCCCGCCGGAAAAATCGGCAAGAGTCTCATCTTCAAGGTAAAAGATGTGATGAGGAAGCAGGATGAGCTTCCGATTTGCAGGGAATCAGATTTGATTATGGATCAGCTTGTGGAGCTAACGAGTAAAGGATGTGGATGCCTGCTTGTTGTAGATGGCGATCACCGTCTGATTGGGACGTTTACCGACGGTGATCTGCGTCGTACTCTGAAAGCTAGTGGAGAGGCCATTTTCAAACTCACTGTGGGGAAAATGTGTAACAGGTAA 876 0.5502 MGSLPAFPLGLSPKQGVNTHIDQTTLADLFKAQQNHLNFFFDHIDHSQTLAFTNALLDTAGTVFFTGVGKSGFVANKISQTLVSLGVRSAFLSPVDALHGDIGILGDRDVLVLLSKSGATEELLRLVPCARAKGARLIAVTSVEGSALSAVCDMNVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKDEYAANHPAGKIGKSLIFKVKDVMRKQDELPICRESDLIMDQLVELTSKGCGCLLVVDGDHRLIGTFTDGDLRRTLKASGEAIFKLTVGKMCNR. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04390 291 Gene3D - 212 291 IPR046342 -
Seca2g04390 291 Pfam SIS domain 59 187 IPR001347 GO:0097367|GO:1901135
Seca2g04390 291 Gene3D - 20 211 - -
Seca2g04390 291 CDD SIS_Kpsf 61 188 IPR035474 -
Seca2g04390 291 ProSiteProfiles SIS domain profile. 53 195 IPR001347 GO:0097367|GO:1901135
Seca2g04390 291 ProSiteProfiles CBS domain profile. 221 280 IPR000644 -
Seca2g04390 291 Pfam CBS domain 217 274 IPR000644 -
Seca2g04390 291 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 61 276 IPR004800 GO:0005975|GO:0016853
Seca2g04390 291 PANTHER - 3 291 - -
Seca2g04390 291 PIRSF KdsD_KpsF 12 291 IPR004800 GO:0005975|GO:0016853
Seca2g04390 291 SUPERFAMILY SIS domain 25 275 IPR046348 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04390 Seca-Chr2 129008060 129010450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04390 K06041 - gmx:100805755 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04390 2 129008060 129010450 Seca2g04390 2 129008060 129010450 ECH