Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04385 ATGGACAAGTTGAAGCTAGCTCAATTGGGGGAGAGGCTGAAGACAGGTGGGGCTCAAATGGGTCGAATCGTGAGTGGCAAAATGAAGGAGATACTTCAGGCCCCAACACCTGAATCGAAGATGGTGGATGAGGCCACGATGGAGACGTTAGAGGAACCTAATTGGGGCATGAATCTGAGGATATGTGGCATGATCAACAGCGAGGAGTTTAATGGTTCGGAAGTGGTGAAGGCTATCAAGAGGAAGATCAATCACAAGAGCCCTGTGGTTCAGAGGCTCAGCCTTGACTTATTGGAAACTTGTGCTATGAATTGTGATAAGGTGTTTTCTGAAGTGGCTTCTGAGAAGGTGCTTGATGATATGGTTCGGTTGATTGATAATCCACAAGCCCATCATCACAATCGAAGAAGGGCTTTCCAGTTGATTAGGGCTTGGGGTGAGTCAGAGGATCTTGCCTATCTTCCTGTGTTTCATCAAACTTATATGAGTTTGAAAGGAAGAGATGAACCATTCGACATGGCAGGAGGAAATTCACCACCTGTTCCGTATACCTTGGAGTCATATACACATCAAGATCCTTTAGATCCCCCTGAAAGATACCCGATTCCTGAGGGAGGACTAGATGTTTTGGAGGGCTCAGCAGTATTCTCTTCTAATGACCAACATATATCAATTGAAGAGAAGAAAGAGCATCTTGTGGTTGCTCGAAACAGCCTTGAATTGCTCTCTAGCATATTAAGTTCTGAGGCAGAGCCAAAACCTTTAAAGGTGAACTTTTCAAAGTTAAAGAAAAGCAACATTACCTGA 807 0.4436 MDKLKLAQLGERLKTGGAQMGRIVSGKMKEILQAPTPESKMVDEATMETLEEPNWGMNLRICGMINSEEFNGSEVVKAIKRKINHKSPVVQRLSLDLLETCAMNCDKVFSEVASEKVLDDMVRLIDNPQAHHHNRRRAFQLIRAWGESEDLAYLPVFHQTYMSLKGRDEPFDMAGGNSPPVPYTLESYTHQDPLDPPERYPIPEGGLDVLEGSAVFSSNDQHISIEEKKEHLVVARNSLELLSSILSSEAEPKPLKVNFSKLKKSNIT. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04385 268 Gene3D - 29 182 IPR008942 -
Seca2g04385 268 CDD VHS 39 165 - -
Seca2g04385 268 PANTHER TOM1-LIKE PROTEIN 1 1 256 IPR044836 GO:0035091|GO:0043130|GO:0043328
Seca2g04385 268 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Seca2g04385 268 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Seca2g04385 268 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Seca2g04385 268 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04385 Seca-Chr2 128889831 128893626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04385 - - gmx:100803803 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04385 2 128889831 128893626 Seca2g04385 2 128889831 128893626 ECH