Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04349 ATGACAAGTCTCGGTGACAAGAGAATGAATATTTCAGATGAGGATTCCGTCCCTCTCCCGGCGACGACGGAGGAAGATTCACCATCGACCGTAATCATCCCCGGCCTCCCAAACGACATCGCAACATTGATCCTCTCAAGGGTACCCTACGCTTTCCACGCTCGTCTCAAAGCCACATCCAAAGCATGGAAAGCGGTGCTATCCTCCAAGTCCTTCCTCTCTTCCCTCAAACGCAACCACCTTATCTGCATCTTCCCTCAAGACCCTTCCATCGCCAAATCCTACCTCTTCGACCCCATCAACATGGCATGGTGCCCTCTTCCCCCTATGCCAATCAACCCACACGTTTACGGCCTCTGCAATTTCGCCGCTGTTCCTTTTGGCCCACACATCTACATCCTCGGTGGGTCCCTCTTCGATACTCGCTCTTTCCCCATCGATCGTCCTTCCCCAACTTCCTCCACTTTCCGATTCAACTTCCATGACTTCTCTTGGGAGCACCGTGCCCCTATGCTCACGCCACGTGGCAGCTTCGCTTGCGCTGCTTTTCCCTCCAAAGGCGAAATCATCGTCGCCGGAGGCGGTTCCCGCCATGTCATGTTCGCTGCCGCTGGCACCCGCATTCGCTCCGCTGAGAGGTACGACGTCGAGAATGACTGCTGGGTGAAAGTGGATCCCTTGCCGGGGTTCCGTGCTGGCTGCGTCGGTTTCGCTGGCGGTGGTGGGAGGGAGTTCTGGGTGATGGGTGGGTACTGTGCGACGAGGAGGGTTTCGAGGATTTTTCCGGTGGATGAGTATTGCAGGGATGCTGTGGTGATGAGATTGGAGGATGGCACGTGGCGAGAACTTGGGGATATGTGGGATAATGAAAGGGCTAAGCCTGGGAAGATTGTTGTGGTTGATGATCAAGTTTTCATGCTTGTAATGAATGAAATTTTCAGGTATGACATGTCTTCAAATAGTTGGCTATCTGAGGCTCGTGTTCCAAGAAGAGGTCATTTTGGTTTTTTAGCACTAAACAGGGAGCTATATGTATTGGCACATTCATATGACGATGATTTCACAGAAACACGAATTTCCAGACGCAATAAGAGGACAGGAATGATGTGCTTTCAAGTCTATAACCTTGAAAAGAAGACGTGGAAAACTGTTGTCACAAAGTCACCATTCAACTACCCTATAGATCTCAATAGTACTGTATTGAGCACAATTTGTCTATGA 1221 0.507 MTSLGDKRMNISDEDSVPLPATTEEDSPSTVIIPGLPNDIATLILSRVPYAFHARLKATSKAWKAVLSSKSFLSSLKRNHLICIFPQDPSIAKSYLFDPINMAWCPLPPMPINPHVYGLCNFAAVPFGPHIYILGGSLFDTRSFPIDRPSPTSSTFRFNFHDFSWEHRAPMLTPRGSFACAAFPSKGEIIVAGGGSRHVMFAAAGTRIRSAERYDVENDCWVKVDPLPGFRAGCVGFAGGGGREFWVMGGYCATRRVSRIFPVDEYCRDAVVMRLEDGTWRELGDMWDNERAKPGKIVVVDDQVFMLVMNEIFRYDMSSNSWLSEARVPRRGHFGFLALNRELYVLAHSYDDDFTETRISRRNKRTGMMCFQVYNLEKKTWKTVVTKSPFNYPIDLNSTVLSTICL. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04349 406 Gene3D - 69 392 IPR015915 GO:0005515
Seca2g04349 406 SUPERFAMILY Kelch motif 85 384 IPR015915 GO:0005515
Seca2g04349 406 Pfam Kelch motif 186 228 IPR006652 GO:0005515
Seca2g04349 406 Pfam Kelch motif 119 171 IPR006652 GO:0005515
Seca2g04349 406 SMART kelc_smart 188 241 IPR006652 GO:0005515
Seca2g04349 406 SMART kelc_smart 296 341 IPR006652 GO:0005515
Seca2g04349 406 SMART kelc_smart 130 185 IPR006652 GO:0005515
Seca2g04349 406 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 22 406 - -
Seca2g04349 406 SUPERFAMILY F-box domain 32 87 IPR036047 GO:0005515
Seca2g04349 406 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04349 Seca-Chr2 128318740 128323374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04349 - - gmx:100820159 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04349 2 128318740 128323374 Seca2g04349 2 128318740 128323374 ECH