Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04328 ATGCGCGTGAAGCGCAACCTCAACCATTTCCGCGTGAACTACGCCATGATCGTCCTCTTCGCCTTGTTCCTTAGCCTCTTATGGCACCCTGTCTCCATCATCGTCTTCTTGGTCGCGCTCGTCGCGTGGTTCTTCCTCTACTTCTTCAGGGACGAACCGGTGGTGTTGTTTGGACGCGCCGTCGATGACAGGGTGGTGGCGGCAGTGCTAGCGACGGTGACCGTCGTGGCCTTGATGTTCACCGGCGTGTGGGCGAACGTGTTAATTTCGGTCCTTGTTGGGGTTGCGCTTGTTGTGTTGCACGCTGCGTTTAGGAGCACAGAGGATCTGTATGTGGATGAGCATGATGGTTATGATGGAGGGTTGCTTTCATTTGTTGGGGGTACCCCCACCAAGCGAACAGGGTATATACCTTAA 417 0.5492 MRVKRNLNHFRVNYAMIVLFALFLSLLWHPVSIIVFLVALVAWFFLYFFRDEPVVLFGRAVDDRVVAAVLATVTVVALMFTGVWANVLISVLVGVALVVLHAAFRSTEDLYVDEHDGYDGGLLSFVGGTPTKRTGYIP. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04328 138 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 2 116 IPR004895 -
Seca2g04328 138 Pfam PRA1 family protein 2 114 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04328 Seca-Chr2 127972360 127972776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04328 K20359 - gmx:100794255 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04328 2 127972360 127972776 Seca2g04328 2 127972360 127972776 ECH
Seca8g05706 8 148862376 148862984 Seca2g04328 2 127972360 127972776 PCT