Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04297 ATGGATTATTGCCTTTCAAAGACTTTCATTCTTGTGATCACCTTCATTTCTACCATAATCTGTCACGTTTTCTCTCTCTCAATCAGTTTAAACGATGTAGAATGCGTATCAGAGCACATTCTACATGATGGTGACACTGTTTCTGGGAATTTTGTAGTCATGGACCATGATATTTTTTGGAGCTCAGATCATCCTGGAATTGATTTTACCGTGACATCTCCTGAAGGGATTGTGGTGTATTCTTTGAAGGGAACGGCAGGGGAGAAGTTTGAGTTCAAAGCCTCACGAAATGGAATTTTCAAGTTCTGCTTTCACAACCCTTTCTCTATGCCGGAGACTGTCTCTTTTTACATTCACGTTGGCCACATCCCAAATGAGCATGACTTAGCTAAAGATGAGCATTTGGACCCAATTAACGTGAAGATTGCTGAATTGAGAGAAGCATTGGAGTCTATTATAACAGAGCAAAAGTACTTGAAAGCACGGGATGCTAGACATCGATATACAAACCAGAGCACCAGAAAACGTGTTGTTTTCTACACAATCTTGGAGTATATTTTATTCGCTGCTACAAGTTTATTACAAGTAGTATATATCCGTCGCCTCTTCAGCAAATCATTTGCCTACAACCGAGTGTAG 639 0.3991 MDYCLSKTFILVITFISTIICHVFSLSISLNDVECVSEHILHDGDTVSGNFVVMDHDIFWSSDHPGIDFTVTSPEGIVVYSLKGTAGEKFEFKASRNGIFKFCFHNPFSMPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESIITEQKYLKARDARHRYTNQSTRKRVVFYTILEYILFAATSLLQVVYIRRLFSKSFAYNRV. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04297 212 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 40 129 IPR036598 -
Seca2g04297 212 SMART EMP24_GP25L_2 25 204 IPR009038 -
Seca2g04297 212 Pfam emp24/gp25L/p24 family/GOLD 28 203 IPR009038 -
Seca2g04297 212 ProSiteProfiles GOLD domain profile. 33 120 IPR009038 -
Seca2g04297 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 24 205 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04297 Seca-Chr2 127564615 127566397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04297 K20347 - gmx:100789501 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04297 2 127564615 127566397 Seca2g04297 2 127564615 127566397 ECH