Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04275 ATGTCGTCCTTGATAGCAGATTTCCTCCATCAGAGTGGCGGCACGGCCGTCATCGACGGCGGTCTTGCGACGGAGCTCGAACGCCATGGCGCCGACCTCAACGATCCACTTTGGAGCGCAAAATGCCTCCTTTCATCTCCTCACCTCATTCGCCAGGTACACCTTGATTACCTGGAAAATGGTGCAGACATTATAATCACAGCATCTTACCAAGCCACCATTCAAGGTTTTAAAGCCAAAGGCTTTTCTAATGAAGAAGGTGAAGCCTTGCTCAGAAAAAGTGTTGAAATTGCTCGTGAGGCCCGTGATGTGTATTATGAAAGATGTGCTGCTGCATGCTCTTCAGGTGATGGGGCTGATGGTGGTAGAATCCTCAAACAACGCCCTATCCTAGTTGCAGCATCAGTGGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGAATTATGGTGATGCTATCACGTTGGAAGTACTTAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCTGATTCAGGTGCTGACCTGCTTGCTTTTGAAACAGTACCAAATAAACTTGAAGCTCAGGCGTATGCAGAGCTTCTGGAAGAAGAGGATATAAAGATTCCAGCATGGTTTACTTTTAACTCTAAGGATGGAATTAATGTTGTTAGCGGTGATTCTTTTGTGGAATGTGGCTCAATTGCTGAATCATGCAACAAAGTTATTGCTGTTGGAATCAACTGCACCCCACCTAGATTTATACATGGTCTGATAGTTTTGCTTAAGCAGGTAACTACAAAACCAATTGTTATATATCCAAACAGTGGGGAAACTTATGATGGTGAGCAAAAGGAGTGGGTGCAAAATACAGGTGTTACAGATGAAGATTTTGTGTCATATGTACATAAATGGTGTGAGTTAGGGGCTTCCCTCGTAGGTGGCTGTTGCAGAACGACCCCAGCTACCATTAGAGGGATATACAGGACACTCTCCAGCAGTCAATCTGCTACTCTTGCCACAAAGTGA 1020 0.4471 MSSLIADFLHQSGGTAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGFSNEEGEALLRKSVEIAREARDVYYERCAAACSSGDGADGGRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAITLEVLKDFHRRRVQILADSGADLLAFETVPNKLEAQAYAELLEEEDIKIPAWFTFNSKDGINVVSGDSFVECGSIAESCNKVIAVGINCTPPRFIHGLIVLLKQVTTKPIVIYPNSGETYDGEQKEWVQNTGVTDEDFVSYVHKWCELGASLVGGCCRTTPATIRGIYRTLSSSQSATLATK. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04275 339 PANTHER ZGC:172121 11 332 - -
Seca2g04275 339 FunFam Homocysteine S-methyltransferase 5 327 - -
Seca2g04275 339 SUPERFAMILY Homocysteine S-methyltransferase 12 330 IPR036589 -
Seca2g04275 339 PIRSF BHMT 279 337 IPR017226 GO:0008168|GO:0008270|GO:0009086
Seca2g04275 339 PIRSF BHMT 5 126 IPR017226 GO:0008168|GO:0008270|GO:0009086
Seca2g04275 339 ProSiteProfiles Homocysteine-binding domain profile. 4 328 IPR003726 -
Seca2g04275 339 Gene3D - 6 326 IPR036589 -
Seca2g04275 339 Pfam Homocysteine S-methyltransferase 17 326 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04275 Seca-Chr2 127276141 127282089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04275 K00547 - gmx:100790567 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04275 2 127276141 127282089 Seca2g04275 2 127276141 127282089 ECH