Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04272 ATGGAACACCTCAGTACTTTTCAACTGACAGTGATAGCCCTTATAATTGCTTCAGTAAATTTGGTTAAGGGGCAGATTAGTACACCCTGCACAACCTCTATGATGAGCACTTTCACTCCATGTGCCAACATAATTACAGGAAGCACAAATAATGGTTTAGTACCACCAACTACATGTTGTGAGTCATTAAGGTCTTTGATGAGTACTAATACGGATTGTGCCTGCCTCGTAATATCAGCTAATGCTCCACTTTTCCCACTACCCATTAATCAAGCTCTTGCCCTTGCCCTTTCACAAGCATGCAACATTAATGGAGTTTCTGCACAGTGCAAAGGTCTTCACGTTCTCCTTTACCAGCTCCGGGCTGAAACTGACTATTCATTGGCAGGCCCAGCAGTTCTTGGATCAAACAGCTCAACTCTCCCTTCAAGTGCTGCATCTCCCTTAAGCCCACAAGTTTCAAAAACCATGGCTGTGACTGAAGCACACAAATATGAGAATCTTCAATTGGCAACGGCACCAGCATCACCACCAGTGGAAACAGAAGCTCCCACTACAACTCTAAGAATCCGACCAGTTTTCACTCCACTTCCTTCAGCATCTCATCCATCTTATGTTTCCTTGTCACCTTTTGCATCCATACTCATAGGAATCATTTGGTATCTATTAAATTAA 675 0.4311 MEHLSTFQLTVIALIIASVNLVKGQISTPCTTSMMSTFTPCANIITGSTNNGLVPPTTCCESLRSLMSTNTDCACLVISANAPLFPLPINQALALALSQACNINGVSAQCKGLHVLLYQLRAETDYSLAGPAVLGSNSSTLPSSAASPLSPQVSKTMAVTEAHKYENLQLATAPASPPVETEAPTTTLRIRPVFTPLPSASHPSYVSLSPFASILIGIIWYLLN. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04272 224 Gene3D - 27 108 IPR036312 -
Seca2g04272 224 CDD AAI_LTSS 38 103 - -
Seca2g04272 224 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 159 IPR043325 -
Seca2g04272 224 SMART aai_6 30 110 IPR016140 -
Seca2g04272 224 Pfam Probable lipid transfer 13 110 IPR016140 -
Seca2g04272 224 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 105 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04272 Seca-Chr2 127217284 127219449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04272 9 111 Lipid Metabolism Gene Families AT2G48140 51.429 4.77e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04272 - - gmx:100786841 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04272 2 127217284 127219449 Seca2g04272 2 127217284 127219449 ECH