Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04230 ATGGAAGCAACGCGACTCTCCTTCCATCACTTCTATCCGCACAGCTTACTAACGAAACCCAACGCTCTTCAAGGAAGAAGACATTCACAAAGCATCCAAGGAATTGGAACTAGGGTTTCCTTTCTCACAATCCCCGCAATCAGCATAAAGAATTTTCCCTCGCCGAACCGGTCGAAGGTGAACCGGAGGAGCCTTTTTGTTAACTTCTCCGACCGGCTCCGAAGTGACTATACGCGCGTCGAGGCTCCTTCGCTTTCGAATGAGGAAATTGTTGGCGGCGTCGACGGGGAAGCGATTGTTGCAGCACTTCCGGGCTCTGATAACTCGAGAACCCTAGAGTTCAAACCCAGAACGTACAAAAATAGGTTTCTGAACTTTGTGCGTTTGAGTTCAGTACTTAATGGTGCTGCTGAATCGTTTTTCAAGAGTGAGATTCGGAGAAGGCTGTTTGTGACTGCTGTGTTAATTGTAATCAGTCGCGTTGGTTATTTTATTCCTCTTCCTGGATTTGACAGAAGGTTGATACCACAAGACTACATGAGCTTTGTCGCTGGTTCATCTGTTGATGAACTCGGTGACTTCGCCTCTGAGCTCAAGCTATCTCTTTTCCAGCTGGGAATCAGTCCTCAGATAATAGCGTCCATTATTATGCAGGTACTCTGTCATGTTGTTCCTTCTCTAGTAAAGCTGCGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATTGTGGAAGCTCTAATAGTTTCTTGCTACTCACTTCCATACTCAGTTTATGCTGCTAGTCATAGGTTCAAACATGTAATGCTGACAACTTTGTTGCTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACTATATCAGAATCCGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTGGGAATACTTACGGGTTATATGGAAACATTACACAAAATGCTTACTCAGATTTCAGTGAGTGCTGTGAGTTGGTGGCCATATGTGCTTGCAGTATTGGGTATCTTCACCACAGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCAGCAAGGGAGCAATCGCCAATTACTGAAGTGGAGCCATATATTCCTTTCAATATAAATCCAGCAGGGATGCAACCTGTTCTGACCACCTCTTATCTCTTGGCATTTCCAAGCATTCTTGCAAGCCTGCTTGGGTCACCTTTTTGGGAGAATGTCAAGGAAATATTGAACCCTGAAACTTCCATCGGTGCTGAGCCGTGGGTCTACTATTCCATATATGCCTTTTTTGTCTTCCTGTTCAATATATTTGATATTGTAAGTTCTCTTTGCTGCGATTACACATTTCGTTTATGCAGCACAGTGCAGGATATGAGCGTTGAATTCGACGCAATGCATTCCGAGTATAAGCAGCTGGTAGAGATAACTATGGGAACTGAAGTGAAACCATCGTCTCGGAGAAATCATGTTAGCAGAATGAGGGATATCAAGATGGGAATAAGGAGATTGGATAAGTTGATGACTTCACTTTTGAATTTACAAACTGCAATTAAAGTGATGATCAACGAGGCTCCCACCGTAGAGGGAGTTATTTTGGCTCTTGGTGCTAGTCCACTTCGACCTCAGCACGTTTATGTCATGAATTTTCCCTGCGGAATTGCTGTTTCCAAGGTTGAGGATGATTTTGCTAGGAGCAAAGCAGCAGAGGGTCTTTCAAGAAAGGCTGTTCGGACATTGATATCAAAGGGTGCTGGGTCTGTGACTTATCCCGGTCCTATCAAATTGTTTGTGTTAATTAAGGCTCCTTCTTCTTTCAATCAGCCTCTGCATTTTCTACCTAAACGTGATTTTAGGTATAACAGAAAGGTTGTGCCTCTCAGACTACTGTTTAAGTGCCGAAACCAGGATCAGGAAGTGGCTACTCCTACTTCAGAAGATTCGATCTGGTTTCAATGCCGGCATGTGATAAAAGGCCTTGCAATGAACACAACGCCAGAAGAATAA 2076 0.435 MEATRLSFHHFYPHSLLTKPNALQGRRHSQSIQGIGTRVSFLTIPAISIKNFPSPNRSKVNRRSLFVNFSDRLRSDYTRVEAPSLSNEEIVGGVDGEAIVAALPGSDNSRTLEFKPRTYKNRFLNFVRLSSVLNGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMSFVAGSSVDELGDFASELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAIVEALIVSCYSLPYSVYAASHRFKHVMLTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQISVSAVSWWPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLGSPFWENVKEILNPETSIGAEPWVYYSIYAFFVFLFNIFDIVSSLCCDYTFRLCSTVQDMSVEFDAMHSEYKQLVEITMGTEVKPSSRRNHVSRMRDIKMGIRRLDKLMTSLLNLQTAIKVMINEAPTVEGVILALGASPLRPQHVYVMNFPCGIAVSKVEDDFARSKAAEGLSRKAVRTLISKGAGSVTYPGPIKLFVLIKAPSSFNQPLHFLPKRDFRYNRKVVPLRLLFKCRNQDQEVATPTSEDSIWFQCRHVIKGLAMNTTPEE. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 149 167 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 241 264 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 445 467 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 276 301 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 302 325 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Seca2g04230 691 PRINTS Preprotein translocase SecY subunit signature 400 419 - -
Seca2g04230 691 Gene3D SecY subunit domain 133 466 IPR023201 -
Seca2g04230 691 PANTHER MAD2L1-BINDING PROTEIN 476 688 IPR009511 GO:0005634|GO:0007096
Seca2g04230 691 SUPERFAMILY Preprotein translocase SecY subunit 130 462 IPR023201 -
Seca2g04230 691 Pfam SecY 201 463 IPR002208 GO:0015031|GO:0016020
Seca2g04230 691 Gene3D - 477 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04230 Seca-Chr2 126569348 126586921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04230 62 465 Miscellaneous Gene Families AT2G31530 73.544 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04230 - - gmx:100803256 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04230 2 126569348 126586921 Seca2g04230 2 126569348 126586921 ECH