Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04206 ATGTTCCCTCTGGCTCTGAATCCCCTGAATCATGGTGATCAGAGGGTGTTCCCACCGAGGGACTTTGTGTATGATGCTGAGGATGTTCCATTTGGGACACTCTGGTGGTTTGTTTATTCTGGAATTTCTTGCTTGCTTGTCCTCTTTGCTGGGATTATGTCTGGTCTCACTCTTGGATTAATGTCTCTGGGCCTTGTTGATCTTGAGATTCTTCAGAGGAGTGGCTCCTCCACTGAGAAAAAACAAGCTGCTGCTATTTTGCCGGTTGTTCAGAAACAACACCAGTTGCTTGTAACCTTGCTTCTCTGTAACGCTTGTGCCATGGAGGCACTTCCAATTTACCTTGATAAAATTTTTCATCCTGTTGTAGCAGTAATTTTATCAGTAACATTTGTTCTAGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGTCTCTATGTTGGTGCAAATTTTGTGGGGCTTGTTCGTGTGCTGATGATCATCTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTCTACTTGGACACAATGAAGTACTGTTTAGGCGAGCACAATTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACACATGATGAGGCAACAATTATCAGTGGAGCACTAGATCTCACTGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCCTTGGATGTTGCTTCTAAATTGGACTGGGAAGCAATTGGTAAAATTCTTGCAAGAGGTCATAGCCGTGTACCTGTATACAGTGGAAACCCCAAAAATATTATTGGCCTCTTACTAGTAAAAAGTCTTCTTACTGTAAGAGCTGAAACAGAGACTCCAGTTAGTGCTGTTTCCATCCGGAGAATTCCTAGGGTTCCAGCTGATATGCCTTTATATGATATACTGAATGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCTGTAGTGAAGGTTACAAGAGAGAAAAACAACCCTCAGGCAACTGGTGACATTGAGAAATCCAAGGATAAAGATGTCATCAAACATAGTTCTCAACTTACTATGCCATTGCTAGCCAGGTCTTCTATGAAATCAGACAATGTTGCTGTCAATATTGACAAGCCTCCTAGGCATGCTGCCAACCAACTTTGTCAACAAAATGGCAATGTAACTAATGGTTTCCATCACTTTCCTGATAATGATGAAGATGGGGAAGTTATTGGCATCATAACACTGGAGGATGTTTTTGAAGAACTCCTGCAGGAAGAAATTGTGGATGAGACAGACGTGTATATAGATGTACATAGAAGAATACGTGTTGCTGCTGTGGCAGCTGCTTCATCTGTGGCACGAGTACCATCTGGCCAAAAGTTGACAGGTCACAAGCTTGTAGTAAGTTAG 1419 0.4221 MFPLALNPLNHGDQRVFPPRDFVYDAEDVPFGTLWWFVYSGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPVVAVILSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHNEVLFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTREKNNPQATGDIEKSKDKDVIKHSSQLTMPLLARSSMKSDNVAVNIDKPPRHAANQLCQQNGNVTNGFHHFPDNDEDGEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAASSVARVPSGQKLTGHKLVVS. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04206 472 CDD CBS_pair_CorC_HlyC_assoc 228 329 IPR044751 -
Seca2g04206 472 ProSiteProfiles CNNM transmembrane domain profile. 32 214 IPR002550 -
Seca2g04206 472 FunFam DUF21 domain-containing protein At4g14240-like 214 351 - -
Seca2g04206 472 Gene3D - 214 346 IPR046342 -
Seca2g04206 472 Gene3D - 350 433 IPR046342 -
Seca2g04206 472 Pfam Cyclin M transmembrane N-terminal domain 42 213 IPR002550 -
Seca2g04206 472 ProSiteProfiles CBS domain profile. 369 433 IPR000644 -
Seca2g04206 472 SUPERFAMILY CBS-domain pair 360 441 IPR046342 -
Seca2g04206 472 PANTHER METAL TRANSPORTER CNNM 22 450 IPR045095 GO:0010960
Seca2g04206 472 SUPERFAMILY CBS-domain pair 217 329 IPR046342 -
Seca2g04206 472 FunFam DUF21 domain-containing protein At5g52790 388 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04206 Seca-Chr2 126331469 126337154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04206 K16302 - gmx:100777230 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04206 2 126331469 126337154 Seca2g04206 2 126331469 126337154 ECH