Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04185 ATGGCAGCTGTCCCAGCATCGAGGACCGATCCACCGAAAATGGTGCCGCTGCAACCGGCGCCGCCTTTGCTGGTCTCCGACTCCTTCGCCAAGGACGCCATTCTTGCCTGGTTCCGCGGTGAGTTTGCCGCCGCCAACGCCATCATCGACGCACTCTGCGCTCATCTCGCTCACCTCGCTGACTCCTCCTCCGACTATGACTCCGCCTTCGCCGCTATCCACCGCCGCCGCCTCAATTGGATCCCTGTCATCCAGATGCAGAAGTATCACTCCATCGCCGATGTCACTCTCGAGCTCCGAAGAGTTGCTGAGAAGAAAACAGAGTCCGAAGGAGGAGTGAAGAAGAAGAGCAGCCGTGAGAGTGACTTCGATGATGAGAAATGGAAGAAAATGGAAGAAAAGGTGGTTGAAGAAAGTGTTGGAAATGACGGTGACGAAGCCGCGGTGGAGCCGCCGGAGGAGTATGATTCGCCGGATAGTGAGATCACTGATTCAGGATCTCAAGAAATGCAACCCAGTTTGATGAACAATAATATATGTTCCAATCATGAAGAATGTGAAGGACGTTCTTCACAGATCAAGTTGACAAAGGGTTTCACTGCAAAGGAGTCCGTGAAGGGGCATATGGCAAGTTCTTTCGTTCACAAACTCAGTGAATTAATTTTAATAAAGAAGCCTGGATTCATAGAGCCGGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGACATTTTTTCTGAATCAGAAATGTGCAAGCTGACTGATTTTGTGAATGAGATCCATGCTGCTGGCCAGAACGGGGAACTTTCAGGTGAAACTTTTATTCTATTCAACAAACAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGATGATGCCAAAAGCAATATAGAGCCAATTCCTGTATTTCTCCATGGTGTCATTGATCACCTTATTCAATGGCAATTAATTCCAGAGTACAAAAGGCCCAATGGTTGTATCATCAACTATTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGATCAACCTCTATCCACTCTTGTTCTCTCTGAATCAACCATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTTTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAATAGAAGGGTGAGCATCACCTTCTTTAAAGTGAGACCAGACTCCAATCAATGCCAGTCACCAACTCCTACAATGACAACTGCGATGACTCTTTGGCAGCCAAGCATTGCGAGTCCATTGGCTTTGCCAAATGGAGCTCTAAGTGGCTACGAGGCTATGGATATGATGCCCAAATGGGGAATACTAGGTACTCCAATGGTCATGCTAGCCCCTATGCGCCCTATGGCACTGAATACCCGCAAACTTCCTCGCGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGGTCAGCCAGAAAACAGACAAGGCATCTTCCACCGCGTGCCCAAAAAGGACGGCTTATGGCCTTACCTTCCCCAGTTGAATCACACATGGGAGAGTCCACTTCTGACCCCAGCATTATTGTTGAAGGATAA 1662 0.4801 MAAVPASRTDPPKMVPLQPAPPLLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLAHLADSSSDYDSAFAAIHRRRLNWIPVIQMQKYHSIADVTLELRRVAEKKTESEGGVKKKSSRESDFDDEKWKKMEEKVVEESVGNDGDEAAVEPPEEYDSPDSEITDSGSQEMQPSLMNNNICSNHEECEGRSSQIKLTKGFTAKESVKGHMASSFVHKLSELILIKKPGFIEPVNVVKGLKLYEDIFSESEMCKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDAKSNIEPIPVFLHGVIDHLIQWQLIPEYKRPNGCIINYFEEGEFSQPFLKPPHLDQPLSTLVLSESTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFKVRPDSNQCQSPTPTMTTAMTLWQPSIASPLALPNGALSGYEAMDMMPKWGILGTPMVMLAPMRPMALNTRKLPRGGTGVFLPWKGSARKQTRHLPPRAQKGRLMALPSPVESHMGESTSDPSIIVEG. 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04185 553 Gene3D - 229 436 IPR037151 -
Seca2g04185 553 MobiDBLite consensus disorder prediction 104 181 - -
Seca2g04185 553 MobiDBLite consensus disorder prediction 143 160 - -
Seca2g04185 553 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 332 428 IPR005123 -
Seca2g04185 553 SUPERFAMILY Clavaminate synthase-like 232 428 - -
Seca2g04185 553 MobiDBLite consensus disorder prediction 533 553 - -
Seca2g04185 553 MobiDBLite consensus disorder prediction 161 181 - -
Seca2g04185 553 MobiDBLite consensus disorder prediction 104 141 - -
Seca2g04185 553 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 30 534 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04185 Seca-Chr2 126070839 126076354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04185 K10767 - gmx:100776159 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04185 2 126070839 126076354 Seca2g04185 2 126070839 126076354 ECH
Seca2g04185 2 126070839 126076354 Seca2g04185 2 126070839 126076354 PCT