Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04184 ATGAATTTCTTCAAATCCGTTTTCTCAGACGACCCGGACCCTCCAGGATCCGTATCCCACTCCGACAATGCGCACCGCACCGAATCACAAGACGCACCGGCTCACGATTCCTCACCGACCGCCGCCGCCGCTTGGAACTTTGGTGGTCTGATGAAAACCCTAAGCATGAAATCGGAATCAATCATCGAGATATACCGTCGTGATCTGCAGGAATTCGGCACGGGTTTGAAGAAGGAGATGGAGGTTGCTCAGGGTTCTCTTGAAACTGTGGGCCACGCCATTGACCAATTCGGAAACACCGTCATCAAAGGAACGGCTCAGATCATATCTCAAGGCAAGGATGCCATCCTCGAATCTGATTCAGACAACAAGAACAAGAGCTTGAATTCGAAACGGTATAGTAGGTTTGATGCTCAGGTTCGTGCAATCCAGGGTGACCCTAGTACTTACACCCAAGTGCCTGAGGATTTGGACCGCTATAACAAGTGGGAATCAGAGTTTTCGTTGGAAGGGAAGAGCGAAGAAATGGAAGGGTTTCTCAGAGAGAATGATGCTATGGAAAGTGTTTACAAAAGGGTTGTTCCCAACACCGTTGATCGTGAAACGTTTTGGTATAGGTATTACTATAAAGTTCATAACCTCAAGAGAGCTGAGGACGTGAGGGCTAGGCTTGTGAGAAGAATGTCAAGGGAAGAGGAAGAGCTGAGTTGGGATGTTGAAGAGGATGAAGAGTATGTGAGTGTTGAGAATAAGGGAAGAGGGGAAGGTGTGGTGGGAACAAAAGGGTTGAATGTGGAAGAGGTGCATGAGCATGATGAGTCTAAGGTAGAAAAGAGAGACAATTTATTGCAAAGTAAGGAACTTGGTAACGGTAACCAGCCTGTTGAGGAATCAAAAGTTGAGAAGGATTCAGAGGTTGTTCGAGAGATGGGTGATGGAAGGAAGGAAATTATGGGCAAAGTGGATAACACTGGGAACTGTAAGGATGATTCTGTAGCAGGTTCTGATAAGAAAGTGATAATGGAAAGGAACTTGGCAGGTTCTGAACCTCCTCAATCTCTCCCCACTCAGCACTCAGAGCATGAGGAGGAACTTGAGTGGGATGAGATTGAGGATCTTAGTAGTCTTGATGAAAAGAAGGTTACTCGGAGTGGTAGCCCAAACAAAGTTGATTTGCGGAAGCGCCTGAGTGCTGCAGAAGAAGAAGAAGAAGATTTGACTTGGGATATTGAAGATGATGATGAGCCTGCCAAGGCTTGA 1260 0.4659 MNFFKSVFSDDPDPPGSVSHSDNAHRTESQDAPAHDSSPTAAAAWNFGGLMKTLSMKSESIIEIYRRDLQEFGTGLKKEMEVAQGSLETVGHAIDQFGNTVIKGTAQIISQGKDAILESDSDNKNKSLNSKRYSRFDAQVRAIQGDPSTYTQVPEDLDRYNKWESEFSLEGKSEEMEGFLRENDAMESVYKRVVPNTVDRETFWYRYYYKVHNLKRAEDVRARLVRRMSREEEELSWDVEEDEEYVSVENKGRGEGVVGTKGLNVEEVHEHDESKVEKRDNLLQSKELGNGNQPVEESKVEKDSEVVREMGDGRKEIMGKVDNTGNCKDDSVAGSDKKVIMERNLAGSEPPQSLPTQHSEHEEELEWDEIEDLSSLDEKKVTRSGSPNKVDLRKRLSAAEEEEEDLTWDIEDDDEPAKA. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04184 419 PANTHER SYNAPSE-ASSOCIATED PROTEIN 14 372 - -
Seca2g04184 419 Coils Coil 214 234 - -
Seca2g04184 419 Pfam BSD domain 163 219 IPR005607 -
Seca2g04184 419 MobiDBLite consensus disorder prediction 265 419 - -
Seca2g04184 419 MobiDBLite consensus disorder prediction 265 284 - -
Seca2g04184 419 ProSiteProfiles BSD domain profile. 163 215 IPR005607 -
Seca2g04184 419 Gene3D BSD domain 124 224 IPR035925 -
Seca2g04184 419 Coils Coil 389 409 - -
Seca2g04184 419 MobiDBLite consensus disorder prediction 373 401 - -
Seca2g04184 419 SMART wurzfinal6 163 215 IPR005607 -
Seca2g04184 419 MobiDBLite consensus disorder prediction 296 323 - -
Seca2g04184 419 MobiDBLite consensus disorder prediction 1 40 - -
Seca2g04184 419 SUPERFAMILY BSD domain-like 133 220 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04184 Seca-Chr2 126068411 126069670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04184 - - lang:109354531 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04184 2 126068411 126069670 Seca2g04184 2 126068411 126069670 ECH
Seca2g04184 2 126068411 126069670 Seca2g04184 2 126068411 126069670 PCT