Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04181 ATGCTTTCAAACAGACAAGAAACAGAGCCTGTTCTCTCCACAATGCTCACACTCTTAAACAAGAACCTCCGTCGTCTCTGCTCCCACCTCCGTTGGCCATTCCGGCGTCGTTCAAAGTCCAAACCATCATCACTCTTCAAGAGGTTCGGTAACACCATTCCAAACCCTCAAAATGAACCAACCACCGAACCTGTTCCAATTCCAATACGAATCGCAACCTTCAATGCTGCACTCTTCTCCATGGCACCAGTGGTTCCCGTAACAGACAAAAACCTAACTGTAACAGAAAAACCTCACGATCGACCGAGAAGCATTCTGAAGCAATCTCAGTTAGAGAACTTTAGAAGAAGCAAGAGCGAAAACAAGTCTAAGTTGAGAGTGTGTATCAATTTACCCGATAACGAGATTTCGTTGCTGAGAAGTCGCCAGAGGAGTTTCTCGGAACACGATAGAGAAGGGCTTTGGAGAGGTGTGGTGAGTTTTGGTGTGGAAGGAGGAAGAAGAACGGTGGTTGAAGTTCTGAAGGAGTTAAACGCTGACGTTTTGGGTTTGCAAGATGTGAAGGCAGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCAAAAGCTCTTGGAATGAACTATGTCTTTGCTGAAAGCTGGGCACCACAATACGGCAACGCTGTTTTCTCTAAGTGGCCTATTAAACGCTGCAAAGTTCAGAAAATCTTTGACCACACTGATTTCAGGAATGTTCTAAAGGCTACTATTGATGTACCCCAAGTAGGTGAACTCAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGCGGATGAAGCAAATAAATGCAATAATTCAATCTAACAATGAGCCACACATCTTAGCTGGAGGCCTTAATTCACTTGATGAATCAGATTACTCTGAAGAAAGATGGACAGATATTTACTATGAAGAGATGGGAAAGCCAACACCCAAGGTTGAAGTGGTGAAATATCTCAAGAGTAGAGACTACACGGATGCTAAGGACTTTGCAGGGGAATGTGTCCAAGGGACATGTAAGTATGGAACTCGTGTAGATTACATATTATCTTCCTCAGATTCTCCATATAAATTCGTTCCTGGGTCCTATTTGGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTTAAAGTAAATAGCAATCCTCAAGAAAATCAGACAAAGAAGAAGAAACAACCAAGACAGAAAGTTATCTTACCAAAGAAGGCAGGGCTGATAAATTTACAGGACTCAAGACTGATAAGATATTACAGGGCTTACTTGGAACTGATACAGAAGCTGGAAGAGTCCACAATCAATGCCCAGCATCACCAGTTGGAGACTCTGCGCTCAATCCTTCTTCACAATGGAAAGGTAAGCTATCTCCAATCCTTCAAGGACAAAGGAGACCCTGCTGATCCTGCCACTTTCACACGTGTGGTGCCTTTGTCTTCCTATGAGGATTATGTGGACTATATTAATCAGATGGCAGATGGGAAACATGATCCTAATCATCCTCTTCTCTGTGTTGATCCTCTCCTCTGCTTCTTCTACAGCTCTGGAACAAGCTGTATGAAACAAAAAATGATCCCTTACTATGATTCAAACCTTTCCAAGGCTGCCTCATTTATTGGTCACCGAGGCAGTGTTGCTAGTCTTCAAAGGTTGTTTCCTCCAAGGTCTGATGTCAACAAGATCCTATGGTTTCTCTATGCTGACAATATTACTACTACTAAATGTGGGTTGAAGGTTATGGCTGCCTCTTCATACCCTTTACAAAGTGGTAAGGCCACCCCACAACAGCTTGCTGCCTTTTCCAGTCCCCTAGAAGTTATTATTGGATCTCATGTTGAGCACCAAATGTATTGCCACCTTCTCTGTGGCCTTAGGAAACTGGAAGTTATAGATGGAATTAGTACCCCTTATGCTATAGGTTTGATTAAAGCCTTTGGTCTTCTTGAGTCCAAGTGGGAGCAGCTATGTGATGATCTTGAACATGGGTTTCCTAGTTATGAAATTTCAGAAGTGGCAATGAGGGAAGCTGTAACCAACACACTTGGTGGTCCTCAGCCAGAATTGGCAAACAGAATAAGGTTAGTTTGTGAAGGTAAGAACTGGGGTGGGATTGTAAATAGATTGTGGCCAAACATTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAGCAGTACTACCAAAAACTTAAGTATTATGCAGGAGAGGTACCTATTCTAGGAGGAGATTACTTTGCTTCAGAGTGCTGTGTAGGTATAAATTTAGACATAATGCAACCCCCTGAGACAACAAGATTTGTCATGCTTCCTACTGCTGCTTACTTTGAGTTTCTTCCATTTAACATGAATGAGGACAATGATGTTGGGGAAGAAACTGTGGACCTTAGCAGTGTAGAGGTTGGGAAAATGTATGAAGTGATTGTTACTACTCATAGAGGATTTTATCGCTACCGGTTGGGTGATGTAGTGAGAGTTGTTGGTTTCCATAATTCTTCTCCACAAGTGGAATTTGTGATGAGGGCACCTAAAACTCCTGCTGAGATTCTGACTGAGAAAGACTTGATTTCAGCAGTTGAAGATTTTCAACTTGCACTGAGAGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAATCAAGGCCAAAGCAGTTGAAGGTATTTGTAGAAGTCCAAGAGGAATCTGATTTTCTTGAGGATAAACTGGAGGAATCAGTTGCAATTTTTAGAAGTTGTATTTCTTCCCTTGAGAGTGGCTTAGGAGCTTTGTATAAGGTGCAGAGGGATAAAGGTCAACTAGGGAACTTACTGATATTCATCTTAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAGAATGGAGCACCAGCTAGTCAATATAAACCACCCAAGATTTTAAGGAATCATGAAGTTGTCAAATTCTTGGAACAATTAACTTTTGTGACAGTATCACTGGATGGCTAA 3027 0.4199 MLSNRQETEPVLSTMLTLLNKNLRRLCSHLRWPFRRRSKSKPSSLFKRFGNTIPNPQNEPTTEPVPIPIRIATFNAALFSMAPVVPVTDKNLTVTEKPHDRPRSILKQSQLENFRRSKSENKSKLRVCINLPDNEISLLRSRQRSFSEHDREGLWRGVVSFGVEGGRRTVVEVLKELNADVLGLQDVKAEEENGMKPLSDLAKALGMNYVFAESWAPQYGNAVFSKWPIKRCKVQKIFDHTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNNEPHILAGGLNSLDESDYSEERWTDIYYEEMGKPTPKVEVVKYLKSRDYTDAKDFAGECVQGTCKYGTRVDYILSSSDSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKVNSNPQENQTKKKKQPRQKVILPKKAGLINLQDSRLIRYYRAYLELIQKLEESTINAQHHQLETLRSILLHNGKVSYLQSFKDKGDPADPATFTRVVPLSSYEDYVDYINQMADGKHDPNHPLLCVDPLLCFFYSSGTSCMKQKMIPYYDSNLSKAASFIGHRGSVASLQRLFPPRSDVNKILWFLYADNITTTKCGLKVMAASSYPLQSGKATPQQLAAFSSPLEVIIGSHVEHQMYCHLLCGLRKLEVIDGISTPYAIGLIKAFGLLESKWEQLCDDLEHGFPSYEISEVAMREAVTNTLGGPQPELANRIRLVCEGKNWGGIVNRLWPNIRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGINLDIMQPPETTRFVMLPTAAYFEFLPFNMNEDNDVGEETVDLSSVEVGKMYEVIVTTHRGFYRYRLGDVVRVVGFHNSSPQVEFVMRAPKTPAEILTEKDLISAVEDFQLALRGAMRIEIVEFASFLDQESRPKQLKVFVEVQEESDFLEDKLEESVAIFRSCISSLESGLGALYKVQRDKGQLGNLLIFILRPGAFDQLSELAIKNGAPASQYKPPKILRNHEVVKFLEQLTFVTVSLDG. 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04181 1008 Pfam Endonuclease/Exonuclease/phosphatase family 167 384 IPR005135 GO:0003824
Seca2g04181 1008 Gene3D Endonuclease/exonuclease/phosphatase 157 393 IPR036691 -
Seca2g04181 1008 MobiDBLite consensus disorder prediction 45 64 - -
Seca2g04181 1008 Pfam GH3 auxin-responsive promoter 442 990 IPR004993 -
Seca2g04181 1008 FunFam Endonuclease/exonuclease/phosphatase family protein 157 394 - -
Seca2g04181 1008 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 438 998 IPR004993 -
Seca2g04181 1008 SUPERFAMILY DNase I-like 164 391 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04181 Seca-Chr2 126037541 126044389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04181 440 998 EF-hand Containing Proteins AT1G23160 32.925 7.52e-90 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04181 K14487 - gmx:100786829 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04181 2 126037541 126044389 Seca2g04181 2 126037541 126044389 ECH
Seca2g04181 2 126037541 126044389 Seca2g04181 2 126037541 126044389 PCT