Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04172 ATGGCCAACTCCAAAACCCTCTTATCCACTTTCTTCATTTTCCTAACCCTCATCACCATCACCATGGCCACCCCCAATTACTATGAAAGTATCTCCCCATCATATCTAGGTTTCCAAGAGGAAAAACTCACACACATTCGCTTCTACTTCCATGACATTGTTACGGGCCCAAAGCCCACCATGGTCATAACCGCCGAGTCTCCACTCAAGGGAAAGTCCAAATCTCCCTTACCATTCGGATCCGTGGTGGTGCTTGAGGACCCTTTAACGATTGGGCCTGAAATTGACTCCAAATTAGTGGGGAAGTCACAAGGGTTTTACTTAACCGTGTCACAAGAAGCAGTGCTAGATTTGGAGCTAGTGATGGGTATGGTGTTTACTTTCGTGGAAGGGAAATATAATGGTAGCACCATAACCGTGATGGGAAGGAACACAATCTCTTCTCCCATAAGGGAGATGCCAATTATTGGTGGGACAGGGGCTTTCCGTTTTGCACGTGGGTTTGTTCAAGCCAAGTCTCATTGGGTTGATTACCAAAAAGGGGATGCTGTTGTGGAATACAACGTTTTTGTGTTCCATTATGCATCAACCTCTTCTTCTCATGAGGTTTTCAGTGATGGGGTTCAATTCATGGCTGATCCTATGCTTCGCAAAACATAA 660 0.453 MANSKTLLSTFFIFLTLITITMATPNYYESISPSYLGFQEEKLTHIRFYFHDIVTGPKPTMVITAESPLKGKSKSPLPFGSVVVLEDPLTIGPEIDSKLVGKSQGFYLTVSQEAVLDLELVMGMVFTFVEGKYNGSTITVMGRNTISSPIREMPIIGGTGAFRFARGFVQAKSHWVDYQKGDAVVEYNVFVFHYASTSSSHEVFSDGVQFMADPMLRKT. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04172 219 Gene3D - 35 183 IPR044859 -
Seca2g04172 219 PANTHER NUCLEOPORIN-RELATED 28 190 IPR004265 -
Seca2g04172 219 Pfam Dirigent-like protein 44 192 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04172 Seca-Chr2 125783665 125784324 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04172 - - gmx:100790549 263.077