Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04170 ATGGCCAAATCCACAGCCTTCATAACCACTTTCTTGATCTCTCTGAACCTTACTTTCCTCTTTTCCATGGCCACAACCACTTACTATGAAAGCATATCCCCAACACTTTTGGGTTTTCGAGAAGAGAGGTTCACCCACCTTCACTTCTACTTCCATGATATTGTGGCGGGCCCAGACCCAAGCATGGTTATAGTGGCCGAGCCCAACGGAAAGGCCAAGAATTCGTTGCCATTCGGAACGGTGGTGGCGATGGATGACCCGTTAACGGTGGGGCCCGAACGTGAGTCCAAAATGATAGGAAAGGCCCAAGGGATATATACGTCAATATCTCAGGAGGATATGGGGCTAATGATGGTGATGACACTTGCTTTCTCTGAGGGAGAGTTTAATGGCAGCACACTCAGCGTGTTGGGGAGGAACATGATCATGCGATACCCTGTCAGAGAAATGGCCATCGTTGGTGGAACTGGGGCTTTCCGATTTGCACGTGGATACACTGAGGGTAAATTTCATTCAGTGGATTTCACAACAGGGGATGCCACTGTGGAATACGACATATTTGTGTACCATCATCATTAG 579 0.4819 MAKSTAFITTFLISLNLTFLFSMATTTYYESISPTLLGFREERFTHLHFYFHDIVAGPDPSMVIVAEPNGKAKNSLPFGTVVAMDDPLTVGPERESKMIGKAQGIYTSISQEDMGLMMVMTLAFSEGEFNGSTLSVLGRNMIMRYPVREMAIVGGTGAFRFARGYTEGKFHSVDFTTGDATVEYDIFVYHHH. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04170 192 PANTHER NUCLEOPORIN-RELATED 27 187 IPR004265 -
Seca2g04170 192 Gene3D - 38 181 IPR044859 -
Seca2g04170 192 Pfam Dirigent-like protein 45 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04170 Seca-Chr2 125727892 125728470 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04170 - K25075 gmx:100817686 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04170 2 125727892 125728470 Seca2g04170 2 125727892 125728470 ECH