Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04159 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGCCTTTCACATGCTTACATTCAGTATCCACCACTTCGGTGCAATGTTCCTGGTTCAAGGGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCCCCAACAGCTGATCAGGTCTTTTCATGGAAAGTCAGTCCCTTTGATCCTATTATTGGTCCCAATACTGATTCAATAAGTGAAGGCCCTATTATAGCTATTCGATATTCATTAGACACAAAGGTTATAGCAATCCAAAGATCAAACCATGAGATACAGTTTTGGGATAAAGAGACGGGGGAATCTTTTAGCCATAAATGCAGACCAGAATCAGAAAGTATACTTGGATTTTTTTGGACTGACAGTCAACAGTGTGATATCGTTCTTGTTAAGACCAGTGGTCTAGACTTGTATGCGTATAATTCACAGTCAAAATCACTGCAATTAGTGGAAACAAAGAAACTGACAGTGAGTTGGTATGTTTACACACATGAAAGTCGCTTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACTTTCCATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTACCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTTTTAGCAGCTGAAGACACCTTTATTGTCACTGTTTATGGTAGAATATATTGCTTGCAAGTTGATAGAGTTGCAATGTTACTCCATTCATATAGGCTATATCGTGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAGCAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTCATACTTTATGATCTCTTTGCAGATTCTCGAGCACCAATATCTGCGCCACTTCCTTTATTATTAAGGGGTTTCCCCAGGTCTGGTACTTCATCTCAATCTAGTGGTAGAGAAAATGAGAGTTCAGATGGTAATGTTGTCAGTAACCGTGAAGCAGTTACCTATGCTGATACATGGACATTTCTAGTGCCTGACCTTGTATGCGATGTGGCCAATAAGATATTATGGAAATTCAATTTAGACTTAGATGTAAGTCATTTGTTCATTTATTTATTAATACCAAATTTAGTGTGCTCTATTTTCATGAATAACCCTATCTTGCAGGCAATTTCTGCCAGTAACTCAGAGGTCCCATCAGTATTAGAGTTCCTACAGCGGCGGAAGTTGGAAGCTAGCAAGGCTAAACAATTGTGCTTGGGTATAACACGGACACTTATTCTAGAGCATAGGCCTTTGTCTGTGGTTGCCAAGGCTATAAATGTGCTCGTCACCTCATATTCCCATTCAATTAAAACTGGTAACTATCTTAAGGGACTGAAACCAGAGAAGACATCAGCTTCTGGTGTACAAAATGCTGGCGCGGATGTATCTACTATAGAAAAAGATGCAACTGGAAAATCGATCATACATGAATCTACCACAAGAGTAGACAGCGGATCTTTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCCTAAACACAGTTCAAAGGAGGCCCGTGTTGGGGGTAAAGTAAACAATGAGAACCTCCCAATTACTGAAGCTCATAGTGCTTATGATATGCAATCATCTTTGCAGTCTGGGCAAGAGGAATCCCAACTTACTTCTGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTCGATGAAGAGATGGTCGGAGACCCTTCTTACGTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTTGGAAAAGATTCGTGTACTCCCAAATCTATATGTATTGATAATTCAACTTCTGGCTCGCAATGAACGTCATGCAGAACTTGGGTTGTATGTCACAAACAAGATTCTGGAGCCCTCTAAGGAAGTTGCACTACAACTGCTAGAGTCTGGTCGTCAGAATACACAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAGCTTGGTTTACATCATGATTATGTATTGCTGCTAGTGCAAGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAGTACAAGGTGGATACCATCCGGCCATCGTTGTTCTTGGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCAGTTCTAAGGTTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGAGCATAATAGATACTACCGTATACTGAATGAGATGAACTCATCCATCACTGTTTGA 2295 0.4048 MSGKASTSKPNIGLSGSDGLSHAYIQYPPLRCNVPGSRGLFYDDGNKLLLSPTADQVFSWKVSPFDPIIGPNTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDKETGESFSHKCRPESESILGFFWTDSQQCDIVLVKTSGLDLYAYNSQSKSLQLVETKKLTVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDTFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSGTSSQSSGRENESSDGNVVSNREAVTYADTWTFLVPDLVCDVANKILWKFNLDLDVSHLFIYLLIPNLVCSIFMNNPILQAISASNSEVPSVLEFLQRRKLEASKAKQLCLGITRTLILEHRPLSVVAKAINVLVTSYSHSIKTGNYLKGLKPEKTSASGVQNAGADVSTIEKDATGKSIIHESTTRVDSGSFNKASTVSSLDSEDESQSANPKHSSKEARVGGKVNNENLPITEAHSAYDMQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYVVAIIIEFLHSANLEKIRVLPNLYVLIIQLLARNERHAELGLYVTNKILEPSKEVALQLLESGRQNTQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSEHNRYYRILNEMNSSITV. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04159 764 MobiDBLite consensus disorder prediction 524 538 - -
Seca2g04159 764 Pfam Colon cancer-associated protein Mic1-like 597 737 IPR009755 -
Seca2g04159 764 SUPERFAMILY WD40 repeat-like 43 203 IPR036322 GO:0005515
Seca2g04159 764 MobiDBLite consensus disorder prediction 507 543 - -
Seca2g04159 764 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 759 IPR040371 GO:0010506|GO:0035658
Seca2g04159 764 MobiDBLite consensus disorder prediction 507 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04159 Seca-Chr2 125481404 125494527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04159 K24763 - gmx:100500389 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04159 2 125481404 125494527 Seca2g04159 2 125481404 125494527 ECH