Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04147 ATGCAACTAGGCGGCATGTCTCTCCCAAAGTCCAAAGCCACAAAAATCGCCTTGGAGCGCCAATCAACGTCTCTATTTGATTCGTTCTGTTTCAGCGGCAACGTAATGACACGAAAGCAGCGGTTCAAGCGAGTTGCTGAACCCAGATTGCCGGTTCAACCGGCCGAGAAAACTCGTCGTTCCAAATCAGCGAAGCTCAGCACCAAACCCAAACCACCATCATCACATTCACAAGAAGCAGATATTTCTTTGGGAACAAAAACCGAAACTTTGCCCCGCGACTTCTTTCAAATCGACGCTCTCGACCTTGCCCCCCGTTTGCTGGGAAAGTTTCTCCGCAGGGACGACGTCGTTCTTCAGATTACCGAGGTTGAAGCATATAGACAAAATGATTCAGCTTGTCATGGTCGGTTTGGCATTACCCCAAGAACTGCCCCTGTTTTTGGACCAGGTGGGCATGCATATGTTTATCTTTGCTATGGTCTTCACATGATGTTGAATGTTGTTGCTGACAAGGAAGGAGTTGGATCTGCTGTTTTGATACGTTCTTGTGCTCCCATTAGTGGATTGGATGTCATTCAACAGCGCCGAGGTCAGAAAACTGACAAACCTATACTTCTTACTGGTCCAGGGAAGGTTGGTCAGGCACTGGGTCTTACAACGGAATGGTCCAACCATCCTCTTTATACCCCTGGTGGTTTGGAACTCTTAGATGGTCCAGAGCCAGAAAATATATTGGTAGGTCCACGTGTTGGTATCCAATATGCTTTGCCAGAGCATGTCAACGCATTTTGGAGATTTGCCATTGCTGATACCCCTTGGATTAGTGCTCCAAGAAACACTCTCAGGCCACCCTTATAG 861 0.4762 MQLGGMSLPKSKATKIALERQSTSLFDSFCFSGNVMTRKQRFKRVAEPRLPVQPAEKTRRSKSAKLSTKPKPPSSHSQEADISLGTKTETLPRDFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRQNDSACHGRFGITPRTAPVFGPGGHAYVYLCYGLHMMLNVVADKEGVGSAVLIRSCAPISGLDVIQQRRGQKTDKPILLTGPGKVGQALGLTTEWSNHPLYTPGGLELLDGPEPENILVGPRVGIQYALPEHVNAFWRFAIADTPWISAPRNTLRPPL. 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04147 286 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 284 IPR003180 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 NCBIfam DNA-3-methyladenine glycosylase 91 276 IPR003180 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 CDD AAG 95 276 IPR003180 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 Pfam Methylpurine-DNA glycosylase (MPG) 95 272 IPR003180 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 MobiDBLite consensus disorder prediction 45 84 - -
Seca2g04147 286 SUPERFAMILY FMT C-terminal domain-like 89 282 IPR011034 GO:0003824
Seca2g04147 286 FunFam Putative 3-methyladenine DNA glycosylase 86 284 - -
Seca2g04147 286 Hamap Putative 3-methyladenine DNA glycosylase. 93 276 IPR003180 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 Gene3D - 85 283 IPR036995 GO:0003677|GO:0003905|GO:0006284
Seca2g04147 286 MobiDBLite consensus disorder prediction 67 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04147 Seca-Chr2 124985347 124988677 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04147 K03652 - gmx:100813424 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04147 2 124985347 124988677 Seca2g04147 2 124985347 124988677 ECH