Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04138 ATGATCACAGTGCAGAAGGACCCAACTGTTTTCCACTTTAGCCATCCACATGCTTTGGAATATACCACTGCCCCCTCCACAGTAATTAGGTGCTCTGGTTGTAAACTAAGAGTTACATTTGGTGAGGATTATTACCAATGTAAAACATGTGCTTTCTCTCTTCACCATGTGTGCTACAACATGCCCTTAATCACAAATCACCCTTCACATACAAAGCATGAACTAGTCCTCTTTGCTGTACCTTCTTCACCTGCTAAACAAACCACCTTTAACTGTGTGGCTTGTAAGCACCATGTCATGGGACTCTGCTACCACTGTGCTGAATGCAACATCTTCTTTCATCCTCTCTGTCTTGCACTTCCTCTTTCACTCACAATCACCTACCATCCTCACAAAATCAAGCTTGAATTTTCACCACCATATGATTTCTTCTGTGATTTGTGCAACAAACCCAGTTACAATGGGTGGCTCTACAGGTGCAGCATGTGTGAATTTGATATACATATTGCTTGTGCAGTTGAAAACATAGAGCCAAAGTTATTCAAGGTTCCATCTTTGCCTCACATGAGGTTTGGTGAAAGTATAGGTGATAGTACCACAGGGTATTATGACTATAAGATCATGAGTTTAGTGGCACAACAAATTAGTGGGGGAATCAATAAGAGCCAAGAAGATTTTGATAGTGCAATAGTTGGATGGGATAAGAAATTGTATAGTCCAAGAAAAAAGCATAGTATAAGTAGTGGGAAAATGAAGACTGTTGAAGAACTTGAATTAGAAGAAACAGAATTAAGTACTCCTGAGTTTGTAGTAAAATTAGAAGAAAGAACACCACTTCGTGATCAATCAACTCCTCTTTCTGATCATGCAAGTCCACCATCATCAAGTTACCAATTTAGTGACTCATATTTTTCAATTGATTTGACAAAGTCATATTCAACTCATGAACGCAGAAGTCAGGTTCGAAAAGAAGTTAGTAGTGACCACAAAACCAGAAGTGTTGTTAGGCCAAGCAATTCAGGGCAAGGTGAAGAACCATTTGGTCTAGTTAATTGGCCAAGCAATGACTCATACAAAATGGCACACCAGAATAAGCTGAATGCAGCATTTTCCAAAGGAGGTGATTTTGGAGAATCAAGCCAGAAAATTGTGATGAAAGATCCTAATGAAAACTTGGCTAAGTGGCCTGTTAAAGATCAAACTATCACCAAATCAGAGCCGGATAGAAACAGCCGTTCAGGTTGGAAGAAATTGCTAACTTGCTGTCTTTAG 1272 0.3947 MITVQKDPTVFHFSHPHALEYTTAPSTVIRCSGCKLRVTFGEDYYQCKTCAFSLHHVCYNMPLITNHPSHTKHELVLFAVPSSPAKQTTFNCVACKHHVMGLCYHCAECNIFFHPLCLALPLSLTITYHPHKIKLEFSPPYDFFCDLCNKPSYNGWLYRCSMCEFDIHIACAVENIEPKLFKVPSLPHMRFGESIGDSTTGYYDYKIMSLVAQQISGGINKSQEDFDSAIVGWDKKLYSPRKKHSISSGKMKTVEELELEETELSTPEFVVKLEERTPLRDQSTPLSDHASPPSSSYQFSDSYFSIDLTKSYSTHERRSQVRKEVSSDHKTRSVVRPSNSGQGEEPFGLVNWPSNDSYKMAHQNKLNAAFSKGGDFGESSQKIVMKDPNENLAKWPVKDQTITKSEPDRNSRSGWKKLLTCCL. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04138 423 PANTHER PHORBOL-ESTER/DAG-TYPE DOMAIN-CONTAINING PROTEIN 11 185 - -
Seca2g04138 423 Pfam C1 domain 13 58 IPR004146 -
Seca2g04138 423 Pfam C1 domain 68 117 IPR004146 -
Seca2g04138 423 Pfam C1 domain 128 172 IPR004146 -
Seca2g04138 423 MobiDBLite consensus disorder prediction 315 331 - -
Seca2g04138 423 MobiDBLite consensus disorder prediction 274 298 - -
Seca2g04138 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 188 IPR013083 -
Seca2g04138 423 SUPERFAMILY Cysteine-rich domain 40 131 IPR046349 -
Seca2g04138 423 MobiDBLite consensus disorder prediction 283 298 - -
Seca2g04138 423 MobiDBLite consensus disorder prediction 315 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04138 Seca-Chr2 124779178 124781047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04138 - - gmx:102661734 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04138 2 124779178 124781047 Seca2g04138 2 124779178 124781047 ECH