Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04088 ATGAAAGAAATAGAGAAGAGAAAAACCTCAAGGAATAATCAGACAAAGAGTTCAAGAAGAACTGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCATCCAAAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAAACCAGCTGCGAATAATATTATAAGTGATTCAAACACGGCCTCAGAGCATTCAGAAACTTATGAAAACCTGGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACTTGTCGAGGTGAAAGTTAATGAAATGGTTGCTAATGAAAGCAAAAAAGAAGTACTTGATAATCATTCCAGTGATATGGAGAAAGAGCAAAGAGAAAGGAATGGAGAAGTATCAGATACTGAGACAGTAAAGGATTCAGTATCATCCCAAGGTGATTCTTTCACAAATGAGGATGAGAAAGTAGAAAAAGCTTCAAAAGATCCTAAAAGTAAGGTTAAAGTGAATCCCTTAGAAAGCAATCATGGATCAAGGGATAGATCTGACAGGAAAACAAACAAAATGCAATCAAAGGTATCAGATAGCAATCAAAAGAAACCTGTTAACTCAAATAAAGGACCTTCCAAAGTTACAAACAAAAATACTTCCTCAACAGATTCTAAGCCTGTGAAAGTTCCTGTAAAAGTTTCGTCAGAATCTTCTGAAGGAGTTGATGAAAACCCTGTTCCTGAGGTCAAGGAAATTGATATCCTTGATGGATCCTCGAATGGTGCTCAGAGCTTAGGAAGTGAAGATGAAAGCCATGAAACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGCAGCTTTGAAAAAAATAGAAGAAATGGAATTGCATATTGAAAAGCTTGAAGAGGAACTGAGAGAAGTTGCTGCTCTTGAAGTGTCTCTTTATTCTGTTGTACCAGAGCATGGGAGTTCAGCACACAAGGTGCACACACCTGCTCGACGCCTTTCTAGGCTCTATTTACATGCTAGTAAGCATTGGACCCAAAACAGGCGAGCAACGATTGCCAAGAATACTGTTTCTGGCCTTATTTTGGTTGCTAAGTCTTGTGGGAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCATTGTACTGAGAGAGATAATTTCACAAGCATTTGGGAATTCATGTCAAGTTAGTCCCCTTATGAGGTTGGCTGAGTCAAATGGGGCTGGCAAGAGGAATGATGGGAAGTCTACAGCACTGAAATGGAAAGGAAGCTTAAATGGTAAGCCAGGAAATAGTTTTATGCAGCTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACATCTGCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTATGACTCCTTATATGCAGTCTCCAGCTGGGGACTCCTCTTCAAATAAATCCATTGGGAGGCTTCTGGGACCTGCTCTGGGCGATCACAATCAAGGAAACTTTTCTATCAACCTCTGGAGAAATGCTTTCCAAGATGCTTTTCAACGGCTTTGTCCTGTTCGAGCAGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTCATGGAACATTGCATAGCTAGACTAGATGTTGCAATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAACTGATCCTATATCAGACCCTATTGTGGATTCAAAAGTTCTGCCAATTCCAGCAGGAGATTTAAGCTTTGGATCTGGTGCACAGCTAAAAAATTCCGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTTGAAGATTGTCTGCAAGAATATCAGGAGAACAGTGGGAATGATGAAAGGCAGGGTGGAGATAGCGAACCTAAATCCTTTGTTCTCCTTAACGACTTGAGTGACCTTCTGATGCTCCCAAAAGACATGCTTATAGATAGACACGTCAGACAGGAGGTGTGTCCATCCATCAGTCTTCCATTGATTATACGGGTCCTCTGTAACTTCACTCCGGATGAATTCTGTCCAGACCCTGTTCCAGGAGCTGTCTTGGAGAGCCTGAATGGGGAGACTTTTGTGGAGCGAAGATTGTCATCAGAATCTGTCAGAAGCTTCCCATATTCTGCTGCTCCTGTTGTGTATGTGCCTCCTTCCTCAGCTAATGTGGCAGAGAAAGTGGCAGAAGCAGGAGGGAAGTCTCACCTAACAAGGAATGTATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATTCATCATTGATAAGATGCCTCCATCTCCAACAGTCACTACTAATGGAGAAGGTAATCATAAAGAGCAAGGGAGCCACCCCACCACAAATGCTAGATACCAACTCCTTCGTGAAGTTTGGTCCATGTGA 2430 0.4193 MKEIEKRKTSRNNQTKSSRRTERRENKLHQDNSSKTLNEKGTESKTPQDKPAANNIISDSNTASEHSETYENLVIHYVDDVNRSEEALVEVKVNEMVANESKKEVLDNHSSDMEKEQRERNGEVSDTETVKDSVSSQGDSFTNEDEKVEKASKDPKSKVKVNPLESNHGSRDRSDRKTNKMQSKVSDSNQKKPVNSNKGPSKVTNKNTSSTDSKPVKVPVKVSSESSEGVDENPVPEVKEIDILDGSSNGAQSLGSEDESHETVNAEENGEHEDKAALKKIEEMELHIEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWTQNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSCQVSPLMRLAESNGAGKRNDGKSTALKWKGSLNGKPGNSFMQLVEDWQETGTFTSALERVESWIFSRIVESVWWQAMTPYMQSPAGDSSSNKSIGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEHCIARLDVAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCLQEYQENSGNDERQGGDSEPKSFVLLNDLSDLLMLPKDMLIDRHVRQEVCPSISLPLIIRVLCNFTPDEFCPDPVPGAVLESLNGETFVERRLSSESVRSFPYSAAPVVYVPPSSANVAEKVAEAGGKSHLTRNVSAVQRRGYTSDEELEELDSPLTFIIDKMPPSPTVTTNGEGNHKEQGSHPTTNARYQLLREVWSM. 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04088 809 MobiDBLite consensus disorder prediction 774 796 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 771 796 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 47 67 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 183 217 - -
Seca2g04088 809 Coils Coil 274 304 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 1 46 - -
Seca2g04088 809 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 266 807 IPR021827 GO:0005643
Seca2g04088 809 Coils Coil 99 119 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 97 127 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 260 274 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 97 274 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 1 67 - -
Seca2g04088 809 MobiDBLite consensus disorder prediction 142 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04088 Seca-Chr2 123567471 123573901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04088 - - gmx:100804499 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04088 2 123567471 123573901 Seca2g04088 2 123567471 123573901 ECH