LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g04032	ATGGCAGTTGGAAAGGAAGACACAGAGATTGTGAAGGCTCGCATCGACAAGAGGAATTACAGAAGGATCGTTCTTCCGAACTCGCTCCAAGTGCTCCTCATTAGCGATCCTGATACCGATAAGTGTGCTGCTTCCATGGACGTTGGCGTCGGTTACTTCAGTGACCCTGCTGGCCTCGAAGGCCTCGCACATTTCCTAGAGCACATGCTGTTTTATGCCAGTGAAAAGTATCCAGTGGAAGATAGCTACTCCAAGTATATTACTGAGCATGGAGGAAGCACCAATGCTTTTACATCTTCTGAGCACACCAATTATTTTTTTGACATTAACACAGATGGCTTTGAAGAGGCTCTGGACAGGTTTGCTCAGTTCTTCACTAAACCATTGATGTCTGCTGATGCCACCACGAGGGAAATTAAAGCTGTTGACTCTGAAAACCAGAAAAATTTGTTATCTGATGCATGGAGAATGAACCAGGAAATATTTTTAATCTCTCTCTCTCTTTTTCTCTCCTCTTGTGAAACATTACAATCTGTACAGCTTCATAAACATATCAGTGCTGAAGATCATCCTTATCATAAATTTAGCACAGGGAACTGGGACACTTTGGAAGTTAGACCAAAGGCAAAAGGAATAGACACAAGGAATGAGCTTATCAAATTCTATGAAGAAAACTATTCTGCTAATCTAATGCATCTAGTTGTATACACAAATGAAAGCCTGGATAAAATTCAAAACCTTGTGGAAGAAAAGTTCCAGGATATTAGAAACACCAACAGAGGTTGTTTTCGTGCTTCTGGTCAGCCTTGCAAATCAGAGCATTTGCAGATTCTTGTCAGGACTGTCCCAATAAAACAAGGTCATAAATTGAGAATTGTTTGGCCAGTAACCCCTGAAATTCGTCATTACAAAGAAGGGCCATGCAGGTATCTTGGTCATCTTATTGGCCATGAAGGAGAAGGGTCTTTATATTACATTTTGAAAAAATTGGGATGGGCTACAGGCTTGTCTGCGGGTGAATCAGATTGGAGTTTGGACTTCTCTTTTTTTAAAGTTGTAATTGATCTTACTGAGGCTGGTCATGAGCACATACAAGATATCATTGGGTTGCTGTTCAAATACATTGAGCTTCTACAACAGTCTGGTGTTTGCAAATGGATATTTGAAGAGCTTTCAGCGGTTTGTGAGACTAAGTTTCACTATCAGGACAAAATTCCTCCTAGTGATTATGTCGTTAATATTGCGTCAAATATGCAGTTTTATCCTGCAAAAGATTGGTTGACAGGATCATCCTTGCCTTCTAAGTTTAGCCCAAGTGTTATCCAAATGGTACTAGATCAGCTTTCTCCAAACAATGTTCGAATCTTTTGGGAGTCAAAAAATTTTGAAGGACATACAGATAAGGTGGAGCCATGGTATGGAACTGCATATTCCATTGAAAAGATTACTGCCTCTGCAATTCAGGGGTGGGTGCTTTCTTCTCCTGATGAAAATATGCATCTTCCAGCTCCTAACAAATTCATTCCAACTGACTTGTCACTTAAAATTGTACAAGAGAAAGTAAAGTTTCCAGTTTTGTTGAGCAGGTCATCTTATTCAGCATTATGGTACAAACCAGATACAATGTTTTCTACACCCAAGGCTTATGTAAAGATTAATTTCAATTGCCCATATTCTGGAAACTCTCCTGAGGCCGAAGTTTTGACAAATATTTTCACACAGTTATTGATGGATTACTTGAATGAATATGCTTATTATGCTCAGGTTGCTGGTTTATATTATAGCATAAATCACATAGTCGGTGGTTTCCAGGTGACTCTTCTTGGTTATAATCACAAGTTAAGGATTTTACTTGAAACTATAGTAGAAAGGATTGCAAAATTCAAAGTGGAAACTGACAGGTTCTCTGTGATCAAGGAAATGGTAACCAAGGAATACCAGAATTTCAAGTACCAACAACCCTATCAACAGGCTATGTACTATTGCTCTTTGATACTACAAGATCAAACCTGGCCTTGGAAAGAAGAGCTAGAAGTACTTCCTGTTCTTCAAGTTGAAGATCTTGCTAAATTTGTGCCAGCAATGCTCTCAAGGACCTTTATAGAGTGCTATATAGCAGGAAACATCGAAAGCCATGAAGCAGAGTCAATGGTTAGGCATGTAGAAGATGTACTCTTTAAGTGTTCAAAACCTCTGTGTCAGCCTTTATTCCCATCTCAGCATTTGACAAATCGCGTTGTCAAGCTTGAAAGTGGCACCAATTATTTCTACCCTTCAAAATGTCTTAATCCTGATGATGAGAATTCTGCTCTTCTGCACTATATACAGGTTGGTCGAGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCCCTTGTTGCAAAGCAAGCAACCTTTCATCAGCTTCGATCAGTTGAGCAGCTGGGGTACATTACTGTGCTCATGCAGAGGAATGACTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGTGAAGGCTCCTGGAAACATTGAGCAGAGAGTTGAGGCATTTCTCAAGATGTTTGAGACCAAACTTAATGAGATGACAATTGATGAATTCAAGGGTAATGTAAATGCTTTGATAGATATGAAATTAGAGAAACACAAAAACTTGAGGGAAGAATCAGCATTTTTCTGGCGAGAGATTAGTGACGGTACTTTAAGGTTTGATAGGAGAGACTTTGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGATTTGATAGATTTCTTCAATGAATATGTCAAAGTTGGTGCACCTCGAAAGAAGACTTTAAGTGTACGAGTTCATGGGAACCTCCATTCTTCTGAATATGAAGCAGAAGCTTCAGAACCACACTTGGCTAAAATAGATAATATTTTCACTTTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTCATGGGCAGATGAAATTGTAG	2958	0.3918	MAVGKEDTEIVKARIDKRNYRRIVLPNSLQVLLISDPDTDKCAASMDVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYITEHGGSTNAFTSSEHTNYFFDINTDGFEEALDRFAQFFTKPLMSADATTREIKAVDSENQKNLLSDAWRMNQEIFLISLSLFLSSCETLQSVQLHKHISAEDHPYHKFSTGNWDTLEVRPKAKGIDTRNELIKFYEENYSANLMHLVVYTNESLDKIQNLVEEKFQDIRNTNRGCFRASGQPCKSEHLQILVRTVPIKQGHKLRIVWPVTPEIRHYKEGPCRYLGHLIGHEGEGSLYYILKKLGWATGLSAGESDWSLDFSFFKVVIDLTEAGHEHIQDIIGLLFKYIELLQQSGVCKWIFEELSAVCETKFHYQDKIPPSDYVVNIASNMQFYPAKDWLTGSSLPSKFSPSVIQMVLDQLSPNNVRIFWESKNFEGHTDKVEPWYGTAYSIEKITASAIQGWVLSSPDENMHLPAPNKFIPTDLSLKIVQEKVKFPVLLSRSSYSALWYKPDTMFSTPKAYVKINFNCPYSGNSPEAEVLTNIFTQLLMDYLNEYAYYAQVAGLYYSINHIVGGFQVTLLGYNHKLRILLETIVERIAKFKVETDRFSVIKEMVTKEYQNFKYQQPYQQAMYYCSLILQDQTWPWKEELEVLPVLQVEDLAKFVPAMLSRTFIECYIAGNIESHEAESMVRHVEDVLFKCSKPLCQPLFPSQHLTNRVVKLESGTNYFYPSKCLNPDDENSALLHYIQVGRDDFKLNVKLQLFALVAKQATFHQLRSVEQLGYITVLMQRNDCGIRGLQFIIQSTVKAPGNIEQRVEAFLKMFETKLNEMTIDEFKGNVNALIDMKLEKHKNLREESAFFWREISDGTLRFDRRDFEVEALRQLTLQDLIDFFNEYVKVGAPRKKTLSVRVHGNLHSSEYEAEASEPHLAKIDNIFTFRRSQSLYGSFKGLHGQMKL.	986

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g04032	985	SUPERFAMILY	LuxS/MPP-like metallohydrolase	6	259	IPR011249	GO:0046872
	Seca2g04032	985	FunFam	Insulin-degrading enzyme	520	746	-	-
	Seca2g04032	985	FunFam	nardilysin isoform X1	264	491	-	-
	Seca2g04032	985	SUPERFAMILY	LuxS/MPP-like metallohydrolase	505	727	IPR011249	GO:0046872
	Seca2g04032	985	SUPERFAMILY	LuxS/MPP-like metallohydrolase	745	973	IPR011249	GO:0046872
	Seca2g04032	985	Gene3D	-	747	980	-	-
	Seca2g04032	985	Pfam	Insulinase (Peptidase family M16)	31	159	IPR011765	-
	Seca2g04032	985	SUPERFAMILY	LuxS/MPP-like metallohydrolase	268	504	IPR011249	GO:0046872
	Seca2g04032	985	Gene3D	-	265	491	-	-
	Seca2g04032	985	FunFam	Putative insulin-degrading enzyme	1	261	-	-
	Seca2g04032	985	PANTHER	NARDILYSIN	4	968	-	-
	Seca2g04032	985	FunFam	Insulin-degrading enzyme-like 1 peroxisomal	747	979	-	-
	Seca2g04032	985	Pfam	Middle or third domain of peptidase_M16	399	678	IPR032632	-
	Seca2g04032	985	ProSitePatterns	Insulinase family, zinc-binding region signature.	51	74	IPR001431	GO:0004222\|GO:0006508
	Seca2g04032	985	Gene3D	-	2	260	-	-
	Seca2g04032	985	Pfam	Peptidase M16 inactive domain	214	390	IPR007863	-
	Seca2g04032	985	Pfam	Peptidase M16 inactive domain	683	870	IPR007863	-
	Seca2g04032	985	Gene3D	-	520	746	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g04032	Seca-Chr2	122619560	122638352	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g04032	K01408		-	gmx:100804856	1788.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca2g04032	2	122619560	122638352	Seca2g04032	2	122619560	122638352	ECH