Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03992 ATGCCGGGGTTAAATGGGTTATTGAAGAAAGGGTTGGGAGAGATGGGCTTCAACGCCGACGGTGGTGCCATCAACTGGTTCCCTGGACACATGGCAGCCGCCACACGAGCCATTCTTCATCGCCTTAAACTCTCCGACCTCGTCATCGAAGTCAGAGACGCTCGTATTCCCTTGTCCTCCGCCAACTCCCACCTTCAGCCCAACCTCTCCGGTAAACGACGCGTCGTCGCACTCAACAAAAAAGACCTAGCCAACCCTAACATCATGCATAAATGGGTGCATTACTTTGAGACGTGCAAGCAAGATTGCATTCCTATAAATGCTCATAGCAAGAGTTCTGTGACGAAGCTTCTCGAGCTAGTGGAGTTTAAATTGAAGGAAGTGATTTCGAGGGAACCTACACTTCTTGTTATGGTTGTTGGTGTTCCTAATGTTGGCAAGTCTGCTTTGATTAATTCCATTCATCGAATTGCGCAATCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGAGCTGCTGTGGGTCCGCTACCTGGTGTTACTCAAGACATTGCAGGATTTAAGATAGCACATCAACCAAGCATATATGTCCTAGATACCCCAGGGGTTCTGGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAAGCTTGCTCTTGCAGGGTCTGTGAAAGATTCAGTGGTGGGTGAGGAGCGTATTGCTCAATACTTATTGGCAGTTTTGAATACCCGGGGGACTCCACTTCACTGGAAGCACCTAAATAACAGGAGAATAGATGGGATTGAATATGAAGCCAAGGAAAATCATGAATATAATCTGAAAAATCTTAAGCGAAAGAGAAGAAATCAGCCAAGTAGATCTGACTTGGTATATGTGGAGGTAACCAGGAGCATTTTTCTGTAA 900 0.4622 MPGLNGLLKKGLGEMGFNADGGAINWFPGHMAAATRAILHRLKLSDLVIEVRDARIPLSSANSHLQPNLSGKRRVVALNKKDLANPNIMHKWVHYFETCKQDCIPINAHSKSSVTKLLELVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHRIAQSRFPVQEKMKRAAVGPLPGVTQDIAGFKIAHQPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRGTPLHWKHLNNRRIDGIEYEAKENHEYNLKNLKRKRRNQPSRSDLVYVEVTRSIFL. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03992 299 FunFam Mitochondrial GTPase 1 24 203 - -
Seca2g03992 299 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 15 273 - -
Seca2g03992 299 Gene3D - 24 203 IPR027417 -
Seca2g03992 299 Pfam 50S ribosome-binding GTPase 137 254 IPR006073 GO:0005525
Seca2g03992 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 218 IPR027417 -
Seca2g03992 299 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 36 205 IPR030378 GO:0005525
Seca2g03992 299 Gene3D - 208 285 IPR023179 -
Seca2g03992 299 PIRSF MG442 21 299 IPR016478 -
Seca2g03992 299 CDD YlqF 26 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03992 Seca-Chr2 121801442 121805852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03992 K19828 - gmx:100801130 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03992 2 121801442 121805852 Seca2g03992 2 121801442 121805852 ECH