Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03980 ATGGAGTCTGTACTTGGTAATTGGCCATCCTACGACCCTCACAACTTCAGTCAGATCCGGCCTTCGGATCCTTCTAGTTCTTCTGGCCAACCTTTTTTAATTCAACTTGCTACTCTTTTTGGTTCAAAAGCAGATCACTCAATTTCTGTTTTCGTGCAGAAAATGACACCAGCTACTTACCATGCTACTCACAGCAGGACCCTTCCACCACCTGATCAAGTGATAAGTACTGAAGCCAGAAATATCCTCCTAAGACATATTTATCAGCATGCTGAGGAAAAGTTGAAACCAAAAAGAGCTGCATCTGGTAACCTTTTACCGGAGCATGGATGCAAGCAACCTAGGGTTTCCACCTGA 357 0.4398 MESVLGNWPSYDPHNFSQIRPSDPSSSSGQPFLIQLATLFGSKADHSISVFVQKMTPATYHATHSRTLPPPDQVISTEARNILLRHIYQHAEEKLKPKRAASGNLLPEHGCKQPRVST. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03980 118 MobiDBLite consensus disorder prediction 95 118 - -
Seca2g03980 118 MobiDBLite consensus disorder prediction 1 28 - -
Seca2g03980 118 Pfam Det1 complexing ubiquitin ligase 44 93 IPR018276 -
Seca2g03980 118 Pfam Det1 complexing ubiquitin ligase 4 28 IPR018276 -
Seca2g03980 118 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 116 IPR033575 GO:0032434
Seca2g03980 118 MobiDBLite consensus disorder prediction 10 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03980 Seca-Chr2 121565073 121568745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03980 K11792 - gmx:100784555 146.747