Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03970 ATGGAAGGAAAGGTGTGGGGATTTTCTTCAAATGAAGATAGTGATGATGAGGTTTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTCACTTTTCATCTGGTTCTGTGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGGTGGAATGAAGAGATGGGAATGACAGAAGTCATTGAGAAGAATGGCAAAATGTGGGTTACAACTGGAATAGTTCGTAATGGCAAGACTTATTCTTCAATTGAGGAGACTTTGTATCTTATGGAACTAGGAGCCTTACATCTCTTAGATAATGGTGATAGAAGTATATCTCTAATTGAAATATACCAAAAGGTTGCTGGCAGGAAGAGTGGATGTTGCTGGGAGCTGTTTGAGGCTTACAGGCACCTCAAGTCTCTTGGCTACATAATTGGGCAGCATGATGTTGCTTGGAGTTTGAAGAGTGTTAGAAGTTCCCATAACCCCGTTACTCTTGAAGGCACAGAAGAAAGCAAACAACTTGTACACATGGGTTCTAAAGTTGAGCTTTCCATCAATCAGTTATTTGGTGAGTTGAAGATCAATGATTTGAAGCCAGATTTTGATATTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCTGGTGATCCAAATTTTCTGCTGTACATGTCTAGGGGTCATCCACCATCTAGAGCAGAAATCGAAGCCCTTGAGAGACAATGCGGTGGCATTCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTTTTTTCCTTTGACAAGGTGGAACTTCCTGCTCTACCCTGA 798 0.4173 MEGKVWGFSSNEDSDDEVYLQNASDEEELHFSSGSVPKLQFRNVKSKGWWNEEMGMTEVIEKNGKMWVTTGIVRNGKTYSSIEETLYLMELGALHLLDNGDRSISLIEIYQKVAGRKSGCCWELFEAYRHLKSLGYIIGQHDVAWSLKSVRSSHNPVTLEGTEESKQLVHMGSKVELSINQLFGELKINDLKPDFDIYLPNSRFRKSSPGDPNFLLYMSRGHPPSRAEIEALERQCGGIPLKICLVTEGRVSFFSFDKVELPALP. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03970 265 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 12 164 IPR024337 -
Seca2g03970 265 Pfam tRNA-splicing endonuclease subunit sen54 N-term 35 96 IPR024336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03970 Seca-Chr2 121429268 121432435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03970 K15326 - ming:122060525 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03970 2 121429268 121432435 Seca2g03970 2 121429268 121432435 ECH