Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03964 ATGAGATGTGGACTTGAGGAGCTTATAACATTGCATCCTCTTCAACCTAACAGGGAAAAGTTGAACTCAATGAACTTGCTTCTGTATATGTCTCCAATCGCAGTCCTAGTTTTGTTGCCTGCAGCGCTTATCATGGAGCAAAATGTTGTAGATGTCACAATATCGCTTGGAAGAGAAAATAAATCTATGTGGCTACTTCTTTTGCTTAACTCAATCACAGCATATGCAGCAAACTTAACAAACTTCTTGGTGACTAAACATACAAGTGCTCTGACACTCCAGGTACTGGGCAATGCTAAGGGTGCTGTAGCTGTTGTTATCTCAATACTCCTATTCAGAAACCCTGTCACTTTTATTGGCATGGCTGGCTATTCAATCACTGTAATGGGAGTTGCTGCATATGGAGAAACAAAAAGGAGATTTAGATGA 429 0.4033 MRCGLEELITLHPLQPNREKLNSMNLLLYMSPIAVLVLLPAALIMEQNVVDVTISLGRENKSMWLLLLLNSITAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGMAGYSITVMGVAAYGETKRRFR. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03964 142 Pfam Triose-phosphate Transporter family 18 134 IPR004853 -
Seca2g03964 142 PANTHER SOLUTE CARRIER FAMILY 35 15 137 - -
Seca2g03964 142 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03964 Seca-Chr2 121229417 121231841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03964 14 142 Organic Solute Cotransporters AT5G04160 72.093 3.11e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03964 - - gmx:100782949 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03964 2 121229417 121231841 Seca2g03964 2 121229417 121231841 ECH