Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03952 ATGTCGTCGGCGGCACTCCACCTCCGATCTCCGATCAACTCCACCTCCGATGCAACTCCGCATTCTCCTTTCCATCACACTCCTTTCAATGCCGACGCCTTAAACCCTTCTATCTCCTCCGCCGCCCGCGGGAGGTCGAGGCCCAGGCTGGTCAAGCTGAGGAAGCAGTCCGCGTCTCAGCACGCTAGGTCCAGGACAAGAACCGCCACCACCGATGACGAAGGCTCCGGCTCGGGCTCCGGCTTCAATCCTTTTCGTTCCGATCAGGTAAATGGTAATGTTAGCGGAGTAGAGAGTGTTGCCGGAGCTTGTGACGGCGGTTCTTGGAACTGTCATCGTGGCTCCGGGAGCGAGGGTTTTGTTTTTTGTGCTAGAAAGGGTGATTCTGATTCTGATTCTGCTAGGGATTTGAATTCTTCCGTGCAGGGCACGGGGAAGGGAACGAGTGAGAAAGGGATGGAGTTTAGGAAGAATGGTGGTGTGGAGTTTGTGTTTAGTGCTCAACGGAGTGATGTGAAATCGGATTCACTTCCCGAGAGCGGGGGAAAAAGCAGTGGTAATGAAGCAAGAACTGTTTCTGGTGATGAAAGGAAGATGACATTGGATTCAGAACGGGAGCAGGGGGAGTCTTATTTTACGGGATTCGTTTTTAGTGCTGGTAGCAACAATTTGGCTTCTAGTTCAAATACAGAAAAGGGAAAATCTAGCGTATCTGTGGGAAATTCGGGGTTTGATAGGGAATGTAAGAATGGATTTGTGTCTGAAAAGCAGGATTGTTTTGCTGACAATCATAGTAAAATGTCAAGTTTTAATGTGAAAAAGCAGGAGTCTATTGATAGCATGAGAAAATCATCTCATGGTGTCAGTGCTTTTACTACTGAGATGAAAAGAAATTGTAATTGTGATAAAAATGCTGATCAGTGTGATCATGCATGTGATGATGATAAGTTTAAGAGTGGATATGGAAATATTAATGGTGTTTCTGCTACTCATAGTGACATTCCTGCATATAAATTACCAGATGAGATGAAGAAACTGAACATCAACTATTCAGAGGGTGCTGATATCACTAGAGATTCAATGAAGTCACGTGTAAATAGTTGTGCTACTTTTGTGTTTGGAGGAAGTAACAAGGATTTTGGCAATTTTAGTGTTAGTTCTGGAACTAATGATGATGCTCAACAGGCTTGTACTAATGCTGATTTTGAGAATATTGGTGGGCAATATGTCAAAGCTTGCGGAACAAATGATGTTCAAAATGAAACTGGTTGTGGTATTGCCTGTGGTTCTACAGGAATACCTTGCTCTAAGCCATCCACTAGTCAGGAAGGAGCAAGAGATTTCCAGAGTGGCAAAATTCCAGAATGTTATGTGTCTAAAGATTCACAGGTGAATGGAGCTGCTACACCATTTTCCTCCTCGTCAATTGGTCTTGCTTCCCATCCAAATTATTATGCTTCTATGGGCCCTTCCTTGAGTGCAGATAATGATAAGCGCGACAATTCGTTTGCAAGTATTCCAGAGGCATCCAAAGAGTCTTTTATGGACTTTAAACCGCCAACATGGGATCCTTCTTGTTTTAAAGACAACTTATTTCCTAAGTTAAATAAAAAATTAGAATCCGCACAAAAGAGCAGATTTTCTAAAGAAAAAGGATCAAAATGCATGAGGCGAAAATTGAGGCCACATTCCTTGAATAAGAAACAGACAAGGCTAGATCATTTGTCAAAGGAAAACACTTCACTTGAAACCCCTGATATTTCTGGTAGCCACTCACCTATGGATTTTTCTCCCTATCAGGAAACAGCAGCAGATGATGAAGATGTAAAAGCTTCAGAAGAATTAAATGATCTGCATTCAACAATTCCTGTTGATTATAAAGATGAACACTTGGCTTCTGTAGGTAGCGAAGATATTAATACAACTGGTCAAAGATGTGGAGATCTAGGTAATGACAATTCATGTAATGGAAGTTCTACTGTTGGTGATGTTCATTCTTCTGGCCCTGAAATAGTCTGGCCTAATACGAACACTGAGCAGTTCAGCTGTAGTGGTATTGCTGGTGCTTCGGCAGATGCTGGGGTTGACATCACCTCAAACTCCCAAGGGCGAAAGGCTAATGGTTTTTGTTTTGTTCATGGTCTGGGTGGTTCAAAGGAGAAAGATTTTACATTTTCTGCGTCATCAACTGTAGAGGGTGCTTCATCATTTAAACATAAACAGAGGAAATTTAGGAGAAAAATGAGGTGTGACTCATTTGTTATCTCTCCAAATGTGAATGGAAAGTTTGTATCTTCTGTACAATTTTCACCGGTTACAACTGCCAACACGCCATCACATTCTGATGTGATGGATAGGTCTCAGATAAATAATGAGTTTGAGGAAAGGGATGGTGCAACATCATCTGCAATTCCAGAAGCCTGTTATAAATGGAGACTCAGGGGGAACCAAGCCCATAAAGATGGGGATCTTTCTAAAGCTGAGGGCTTCTACACACTAGGAATAAATTCTGTCCCTTCAAGTGAAAGATCAGGAGGCTGCATTAAGCCTCTTTTACTGTGCTATAGTAACCGTGCAGCAACACGCATGAGTCTTGGAAGGATTAGAGAAGCTCTAGAGGATTGCATGATGGCTACTTCTTTGGACCCCACCTTTCTGAAAATTCAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGAAGTTGAAAATGCTCAGCAGTGTTATAATAAGTGCTTGGAATCTGGTAATGTTGTTTGTTTGGATCGGAGGGTTATAGTAGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTAAAGTGTATGAATGATGTTGCTGCACTTTTAAATGAGAAAACTTCTGATGCAGCTGGTTCTGCTTTGGAATTACTCACAAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTCCACATGAAGGCTGAGGCTCTATGTTTGCTGCAAAAGTATGAGGCTGCAATTCAGCTTTGTGAACAGAGTCAGTATCTTGCAGAAAAGAATTTTGCCTTGGAAAACAGTGCAAACAATTCCAATAGTTCCATGCAGGACAGTCACTCAAATTTAAATTTGTGGAGGTGGTCAGTGATATCCAGGTGTTACTTTCATTTGGGAAAGCTTGAGGCATCACTTAATGTAATTGAGAAATTACACCAAGTAGTGGCTGCCAATGACAGGTGTGTGATTGATAACATTGAAGACTTGCTGTCATTAGCTACTACAATACGAGAACTTCTAGACCGCAAGAGTGCAGGAAATGAGAACTTTAAATTGGGAAAGTATAAGGAAGCAGTGGAGAATTACACTGTTGCTTTATCTAGCAATATCAAACCACGTCCTTTTGCAGCAATATGTTTCTGCAACCGTGCTGCTGCTTATCAATCTCTGGGCCAAATTGCTGATGCCATTGCAGACTGCAGTATGGCTATGGCCCTTGATGGAAATTATGTGAAGGCAATTTCAAGAAGAGCCACCTTACATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTGTATCTGTTATTGAAACTCAATCCAATGAAAAGGCAAGTGGATCAAGTGGTGGGAAAGAATCAAGGCAAGTTTATCAACGTCTGCTTTCAGTGGAAGACCAAGCCAAAAAGGGGACCCCCTTGGACTTTTACCTCATCTTAGGAATTAAACCAGCAGATACAGCAACTGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCAGACAAGGCTGGTCAATTATTGGCAAGAAGTGAAGCTGGAGATGAAGGTCAAGTCTGGAAGGAAATTTCACAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTTTCAGACCCTGCCAAGCGCTCAGAGTATGATTTAGAAGAGGAGATAAGGAAAGCTTCTAAGCAAAGTAACAGGGGTGGCACATGCAGGAGATCTTCAGATTTTTCTGGGAATGGAAGACCATCTGATGGTTATAGATCTCCCTCTGATAGAACTTCCAACAGACGATATGGACGGGATCATTGGAAGACATATGGACAATCATATTCTCGATGGTAA 4113 0.4235 MSSAALHLRSPINSTSDATPHSPFHHTPFNADALNPSISSAARGRSRPRLVKLRKQSASQHARSRTRTATTDDEGSGSGSGFNPFRSDQVNGNVSGVESVAGACDGGSWNCHRGSGSEGFVFCARKGDSDSDSARDLNSSVQGTGKGTSEKGMEFRKNGGVEFVFSAQRSDVKSDSLPESGGKSSGNEARTVSGDERKMTLDSEREQGESYFTGFVFSAGSNNLASSSNTEKGKSSVSVGNSGFDRECKNGFVSEKQDCFADNHSKMSSFNVKKQESIDSMRKSSHGVSAFTTEMKRNCNCDKNADQCDHACDDDKFKSGYGNINGVSATHSDIPAYKLPDEMKKLNINYSEGADITRDSMKSRVNSCATFVFGGSNKDFGNFSVSSGTNDDAQQACTNADFENIGGQYVKACGTNDVQNETGCGIACGSTGIPCSKPSTSQEGARDFQSGKIPECYVSKDSQVNGAATPFSSSSIGLASHPNYYASMGPSLSADNDKRDNSFASIPEASKESFMDFKPPTWDPSCFKDNLFPKLNKKLESAQKSRFSKEKGSKCMRRKLRPHSLNKKQTRLDHLSKENTSLETPDISGSHSPMDFSPYQETAADDEDVKASEELNDLHSTIPVDYKDEHLASVGSEDINTTGQRCGDLGNDNSCNGSSTVGDVHSSGPEIVWPNTNTEQFSCSGIAGASADAGVDITSNSQGRKANGFCFVHGLGGSKEKDFTFSASSTVEGASSFKHKQRKFRRKMRCDSFVISPNVNGKFVSSVQFSPVTTANTPSHSDVMDRSQINNEFEERDGATSSAIPEACYKWRLRGNQAHKDGDLSKAEGFYTLGINSVPSSERSGGCIKPLLLCYSNRAATRMSLGRIREALEDCMMATSLDPTFLKIQMRTANCHLLLGEVENAQQCYNKCLESGNVVCLDRRVIVEAAEGLQKAQEVVKCMNDVAALLNEKTSDAAGSALELLTKALSISLYSEKLLHMKAEALCLLQKYEAAIQLCEQSQYLAEKNFALENSANNSNSSMQDSHSNLNLWRWSVISRCYFHLGKLEASLNVIEKLHQVVAANDRCVIDNIEDLLSLATTIRELLDRKSAGNENFKLGKYKEAVENYTVALSSNIKPRPFAAICFCNRAAAYQSLGQIADAIADCSMAMALDGNYVKAISRRATLHEMVRDYEQAACDLRRLVSVIETQSNEKASGSSGGKESRQVYQRLLSVEDQAKKGTPLDFYLILGIKPADTATDIKKAYHKAALRHHPDKAGQLLARSEAGDEGQVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRSEYDLEEEIRKASKQSNRGGTCRRSSDFSGNGRPSDGYRSPSDRTSNRRYGRDHWKTYGQSYSRW. 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03952 1370 MobiDBLite consensus disorder prediction 1315 1370 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 1320 1346 - -
Seca2g03952 1370 Gene3D Tetratricopeptide repeat domain 797 941 IPR011990 GO:0005515
Seca2g03952 1370 MobiDBLite consensus disorder prediction 128 153 - -
Seca2g03952 1370 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 10 1370 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 1 93 - -
Seca2g03952 1370 Gene3D Tetratricopeptide repeat domain 1086 1211 IPR011990 GO:0005515
Seca2g03952 1370 PRINTS DnaJ domain signature 1228 1246 IPR001623 -
Seca2g03952 1370 PRINTS DnaJ domain signature 1246 1261 IPR001623 -
Seca2g03952 1370 PRINTS DnaJ domain signature 1284 1304 IPR001623 -
Seca2g03952 1370 ProSiteProfiles dnaJ domain profile. 1226 1312 IPR001623 -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 540 611 - -
Seca2g03952 1370 SMART dnaj_3 1225 1304 IPR001623 -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 71 93 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 566 580 - -
Seca2g03952 1370 SUPERFAMILY TPR-like 1090 1186 IPR011990 GO:0005515
Seca2g03952 1370 MobiDBLite consensus disorder prediction 1 23 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 581 597 - -
Seca2g03952 1370 SMART tpr_5 976 1009 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 1086 1119 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 1124 1157 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 886 919 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 808 841 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 1158 1191 IPR019734 GO:0005515
Seca2g03952 1370 SMART tpr_5 852 885 IPR019734 GO:0005515
Seca2g03952 1370 Gene3D DnaJ domain 1213 1331 IPR036869 -
Seca2g03952 1370 SUPERFAMILY Chaperone J-domain 1203 1308 IPR036869 -
Seca2g03952 1370 CDD DnaJ 1226 1301 IPR001623 -
Seca2g03952 1370 SUPERFAMILY TPR-like 805 1005 IPR011990 GO:0005515
Seca2g03952 1370 MobiDBLite consensus disorder prediction 551 565 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 167 205 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 47 61 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 190 205 - -
Seca2g03952 1370 MobiDBLite consensus disorder prediction 169 189 - -
Seca2g03952 1370 ProSitePatterns Nt-dnaJ domain signature. 1289 1308 IPR018253 -
Seca2g03952 1370 Coils Coil 933 953 - -
Seca2g03952 1370 Pfam DnaJ domain 1226 1309 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03952 Seca-Chr2 121084948 121095719 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03952 K09527 - gmx:100809278 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03952 2 121084948 121095719 Seca2g03952 2 121084948 121095719 ECH