Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03948 ATGAGATCAGGCATGGCGGCGATCTCTCAGTCTCATCTGTGCTTCTTCTCCACCGTTCATCGCAGCAGCCTACACCTCCAGACTCGCTCGCTTCCATGCCCTTCCCTTCGCTCCAAGTTATCAGTTGTTATGAGTCTGGAGAGGCATGGTGCAGATACTCCTGGTTCTGATACCAAAAATACACTAAGTTATGCAGCTGATGTGTCAAAATTGCATGTTGAAGAAAAGCAGAAGTCATATTTAACAAAAGAAGACCATGATGCTGAAAAGACAGGTGCTGGAGAGGCAATGCAGGAAGGTGTTGGTCAACAGAAAAGAACTGCTAAAATTCATGATTTTTGTTTAGGCATTCCCTTTGGTGGTTTTGTTTTAACTGGAGGGATTATTGGTTTCCTTTTTACACGGAGTCCTGCAACACTGAGCAGTGGTGTGCTCTTTGGGGGTGCTTTACTATTCCTCAGCACCTTTAGCTTGAAGGTCTGGAGGCAAGGAAAATCGAGTTTACCATTTATTCTAGGACAAGCAGCATTGTCAGGGATTCTTATCTGGAAGAACTTTCAGAGCTACTCATTGGTAGTACATCTATTTTGA 591 0.4399 MRSGMAAISQSHLCFFSTVHRSSLHLQTRSLPCPSLRSKLSVVMSLERHGADTPGSDTKNTLSYAADVSKLHVEEKQKSYLTKEDHDAEKTGAGEAMQEGVGQQKRTAKIHDFCLGIPFGGFVLTGGIIGFLFTRSPATLSSGVLFGGALLFLSTFSLKVWRQGKSSLPFILGQAALSGILIWKNFQSYSLVVHLF. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03948 196 Gene3D - 95 193 IPR044890 -
Seca2g03948 196 Pfam Transmembrane proteins 14C 116 188 IPR005349 GO:0016020
Seca2g03948 196 MobiDBLite consensus disorder prediction 80 100 - -
Seca2g03948 196 PANTHER TRANSMEMBRANE PROTEIN 14, 15 98 192 IPR005349 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03948 Seca-Chr2 120852709 120856668 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03948 - - vra:106752521 295.819