Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03924 ATGGCTATCTTGTTGTCTACAATTGTATTTCCTTCCACCAAGCTACCCATCTTCAACAACACGCAAGACCATGCCTTTCCAAGTTTTCGCCACTTCACAGATTCTAGCAAGCGTTTCGAGAAAGTTTCGTCCTTGATTGCTTTTGCGGTGAACGGTAACCTCACTCAGAGGAATTATGCTAAAACCACGCCCAAGAGAGATGGTGGAAACCCATTTTTGAGTGAGGGGAGAGATGAAGATGAAGCTCGTGGACCCATTTGCCCTGGTTGTGGAGTCTTTTTGCAAGATAAAGACCAAAACCTTCCTGGGTATTACAAACAAAGGGTGGTGAAAGTGGAAGAGTTTTCAGAAGAGGATGATGGGTTTGATGATGATGATGATGATGATGATGATGATTATGATTATGAAGAAGAAGATGATGAAGTAGGGATTTTGGATAGCAGTGAAAATAAACTTAAGGAAGATACTGAGGGGTTAGCAGATGAGTTTGATTGGGATTCTGATGAATGGGAAGCTGAGTTATTGGGGGAAGATGATGATAAGTTGGAGTTGGATGGGTTTACACCTGCAGGGGTTGGGTATGGTAACATTACTGAGGAGGTCTTGGAGAGGGCAAAGAAGAAGAAGGTATCAAAAGCTGAGAGGAAAAGGATGACTAGGGAGGCTGAGAAGGTGAAAGAAGAGGTTACTGTGTGTGCTAGGTGCCATTCCTTGAGAAATTATGGGCATGTTAAAAACCAGACAGCTGAGAATTTGATACCAGATTTTGATTTTGATAGGTTGATTTCAACTCGGTTGATGAATCCTTCTGGTAGTGGCAGTGCTACTGTTGTTGTCATGGTTGTGGATTGTGTTGATTTTGATGGTTCTTTCCCTAGAACAGCAGTAAAGTCGCTGTTTAAGGCATTGGAAGGAATCAAGGATACCTCAAAACGGGGCAATAAACTGCCAAAGCTTGTCCTAGTTGGAACAAAGGTTGATCTCCTTCCATCTCAGGTTTCTCCTACAAGGTTGGATAGATGGGTTCGACACCGTGCAAGTGCTGGAGGAGCACCTAAGTTAAGTGGGGTTTATTTGGTTAGTTCTCGTAAGGATTTAGGTGTAAGGAATTTGTTGTCCTTCATAAAGAATTTAGCTGGTCCTCGTGGAAATGTGTGGGTGATTGGGGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCATTTGCAAAGAAAGAAGGAGCCAAAGTTACAAAGCTCACAGAAGCTCCAGTTCCTGGGACAACACTTGGGATATTGAGAATTGGAGGAATTTTGCCAGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCATCCATATTTAATGTCAATGAGATTGAACCGGGAGGAACAAAAGATGGTTGAGATACGGAAGGAACTTCGGCCTCGGACATATAGAATTAAGGCAAGTTGCTTATTGCTATTGTCATTTTCTATCCTGGATGCAGGACAGGCTGTACATGTTGGTGGCTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGTCACAGTTTGGGCATCACCAAATGTTTCTCTTCACACAGGGAAAATAGAAAATGCTGAAGAGGTTTGGAATAATCATGTTGGTGTCAGGCTGCAGCCTCCAATTGGTAATGACCGCGCTGCTGAATTAGGCACATTCCAAGAAAAGGAAGTAAAAGTGTCTGGATCCAGTTGGGATGTCAACAGCATTGACATAGCAATAGCTGGCTTAGGTTGGTTCTCTTTGGGTCTCAAAGGAGAAGCAACCATGAAATTATGGACCTATGATGGAGTTGAAGTAACATTGAGGGAGCCTTTAGTCCTTGACCGGGCCCCATTCCTTGAGAAACTAGGTTTTTGGTTACCAAAAGCCATTTCTGATGCTATTGGTAACCAAACTAAACTTGAAGCTCAAAAAAGGAAAAAACTTCAAGATGAGGATACGGAATACGTGGGGGCAGGGGCAGAGCTATCCGCATGA 1998 0.4309 MAILLSTIVFPSTKLPIFNNTQDHAFPSFRHFTDSSKRFEKVSSLIAFAVNGNLTQRNYAKTTPKRDGGNPFLSEGRDEDEARGPICPGCGVFLQDKDQNLPGYYKQRVVKVEEFSEEDDGFDDDDDDDDDDYDYEEEDDEVGILDSSENKLKEDTEGLADEFDWDSDEWEAELLGEDDDKLELDGFTPAGVGYGNITEEVLERAKKKKVSKAERKRMTREAEKVKEEVTVCARCHSLRNYGHVKNQTAENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRTAVKSLFKALEGIKDTSKRGNKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSGVYLVSSRKDLGVRNLLSFIKNLAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAPVPGTTLGILRIGGILPAKTKMFDTPGLLHPYLMSMRLNREEQKMVEIRKELRPRTYRIKASCLLLLSFSILDAGQAVHVGGLTRLDLVEASVETIYVTVWASPNVSLHTGKIENAEEVWNNHVGVRLQPPIGNDRAAELGTFQEKEVKVSGSSWDVNSIDIAIAGLGWFSLGLKGEATMKLWTYDGVEVTLREPLVLDRAPFLEKLGFWLPKAISDAIGNQTKLEAQKRKKLQDEDTEYVGAGAELSA. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03924 665 Pfam 50S ribosome-binding GTPase 385 464 IPR006073 GO:0005525
Seca2g03924 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 275 466 IPR027417 -
Seca2g03924 665 Gene3D - 271 447 IPR027417 -
Seca2g03924 665 MobiDBLite consensus disorder prediction 115 140 - -
Seca2g03924 665 MobiDBLite consensus disorder prediction 59 81 - -
Seca2g03924 665 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 31 655 - -
Seca2g03924 665 Coils Coil 208 228 - -
Seca2g03924 665 MobiDBLite consensus disorder prediction 646 665 - -
Seca2g03924 665 CDD YqeH 232 444 - -
Seca2g03924 665 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03924 Seca-Chr2 120493552 120498504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03924 - - gmx:100805561 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03924 2 120493552 120498504 Seca2g03924 2 120493552 120498504 ECH