Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03917 ATGATGTTCACGTATGTAATAATTTACGAAACACCCTCTTATGGTGCTCATCATTTCTCATTGTGTCATTCGGGTTCAAATGAGCAAATGAAAACTTCTATTAAGAATCCTAAGTGGGTTGATGAGCTTCATAAAAAGCAGCAATTCATTGAATTGGATACAGTTATTGTGGCAATTAATTGCACGGCTGCTGCTAAAAGAATTTTTGAGAGACATGTGGCCCCAAAGAGATCCTTGATCCATCTCTCCATATTTCCCATGTTTTTGGCTATCATAGGGAATCTGTTTTCCAAGTTTATGGCTTCATTCTCCACTGTGTTGTATATTGTTCTTCAGTTTTTCCAAATGCATTTTAATTATGAATCAGAATCATGGATGTATGTGACATCAGCAAATGTATTCAGTAAGACTGCATGGATAAATATCCAAATCCGTTGTTGTCAGATATTATATTGGCCAATCTTTCTTCAGGAGAATGACCTCAGGTCACAATCTTGTGTTGAATATGTAGAGAAAGCTGCAATGCATAGGCATTCTATGTGGTCAACTTTGGTTGTTGATATTCTCCTTGGGAACTTGGTTGGCCGGTCTCTGTTATATAGTCAAGAATCCATTTGTTTGTCACTTTTGAACTCTATCCATGGGTTTGCCACATTTTTGCGCTCTGGGTGTGTTTGGTTAATGGGAAACCCTGCTGGCTTCAAATTGAATGCTGAGATGGCAGGAGTACTTGGCATGGTTTCTTTAAATGCAATCCAAATATGGTCAACACTCTGGATCTTTGTGGATTTCATCTTCAATTATGTTATTCGAGGGCTTTCTATTTTAGGAATTCTTTGTGGATTCACTGTACCTGCTGCTTTGTTCATAGACATGATTGCGCTGGCAACCTTGCATGTTTCAACTCTTCATTGGTTGATTTCACTTGTATATTCATCACAGATACAGGCATTAGCAGCCTTATGGCGGATTTTCAGGGGTCGGAAGTGGAATCCTCTTCGGCAGAGGTTGGATAGCTTTGACTACACTGTGAAGCAACATATTGTTGGATCTCTTTTATTTACACTACTTTTACTTCTGTTACCAACTACTTCCGTTTTCTATATATTCTTTAGTATAGTTGACACAACCATTAACTTCATCTGTCTACTGATTGAAGTTACTATTTCGGTAATTCATGCTACACCATATATCAAGATATTTCTTTGGTTGGTGAGACGAGGAAGATTCCCTTCTGGAATATGGCTTGAAATCATTGGTTGTCAGAGTAATCATACTGTTTCTCTAAGTGCTGATTTTGCTGATGAAATGACCTCATCCAAGGAGTCATTCCATCTAAAAGATTTCAATAGGGAAAAATCTAGTATTCTGGTTTCAGTTCTCCACAGCAACTATTTGAGCATAGGAAAAGTTATCTTGCCTCACTACAAAAATTTATTTTCGGGAGTTTCTGGATCATCCATCTCTAGAGTAGCTTATGGAATCCTCACCGGGAAAAGAATGCCATGTATACGCGGAACACTTCTTCCTTCACCAATGCCATGGATGTCCCTACCCTACAAAGAGTACTGGCACCTTTGTCATGATTCACTTATTGCATGCTTCAGATGA 1611 0.3842 MMFTYVIIYETPSYGAHHFSLCHSGSNEQMKTSIKNPKWVDELHKKQQFIELDTVIVAINCTAAAKRIFERHVAPKRSLIHLSIFPMFLAIIGNLFSKFMASFSTVLYIVLQFFQMHFNYESESWMYVTSANVFSKTAWINIQIRCCQILYWPIFLQENDLRSQSCVEYVEKAAMHRHSMWSTLVVDILLGNLVGRSLLYSQESICLSLLNSIHGFATFLRSGCVWLMGNPAGFKLNAEMAGVLGMVSLNAIQIWSTLWIFVDFIFNYVIRGLSILGILCGFTVPAALFIDMIALATLHVSTLHWLISLVYSSQIQALAALWRIFRGRKWNPLRQRLDSFDYTVKQHIVGSLLFTLLLLLLPTTSVFYIFFSIVDTTINFICLLIEVTISVIHATPYIKIFLWLVRRGRFPSGIWLEIIGCQSNHTVSLSADFADEMTSSKESFHLKDFNREKSSILVSVLHSNYLSIGKVILPHYKNLFSGVSGSSISRVAYGILTGKRMPCIRGTLLPSPMPWMSLPYKEYWHLCHDSLIACFR. 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03917 536 Pfam N-acetylglucosaminyl transferase component (Gpi1) 141 411 IPR007720 GO:0006506|GO:0016020
Seca2g03917 536 PANTHER N-ACETYLGLUCOSAMINYL TRANSFERASE COMPONENT FAMILY PROTEIN / GPI1 FAMILY PROTEIN 4 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03917 Seca-Chr2 120437970 120444508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03917 K03860 - gmx:100793897 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03917 2 120437970 120444508 Seca2g03917 2 120437970 120444508 ECH