Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03907 ATGGCTCAATTACTATCATCTTCTTGCTCCTTGACTATCTCCTCTAGAAATAAACCTTACTTAAAACCGTTGAACCAATGTTCAACATCTTTCTCTATCATGGTTGCTTGCAATAAATCCAGACTTCCATTTAGAAGGCTTTCCTTGCAAGAACAGAAGCCAAGAAGAAGTTCTGCAGTTGTACATGCTACTGCAGTTTCAACAAGCCAGGAAGCCCCAGTTCAAACTAGCTCTGGCGACCCTTTTAAGCCACAGCGAGTCATGGTCATTGGGGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAAGGGTTATGAGGTTGCCATTGTAGATAACCTTGTTCGACGCCTTTTTGATCACCAGCTTGGACTAGATTCTCTAACACCAATTTCGTCTATCCAAAATCGCCTTCAGTGTTGGAAATCTCTCACTGGGAAAAGTATTGAGCTCTACATTGGTGACATTTGTGAATTTGAGTTCTTATCTGAAACCTTCAAGTCATTTGAACCTGATGCTGTTGTACACTTTGGGGAACAGCGATCTGCTCCTTACTCTATGATAGATCGGTCAAGAGCCGTATATACACAGCAAAACAATGTTGTTGGGACACTGAATGTGCTCTTTGCTATAAAAGAGTTCAGAGAGCAGTGTCATTTAGTTAAGCTTGGGACCATGGGTGAATATGGGACTCCAAATATTGATATTGAGGAAGGTTATATTACCATTACTCACAATGGAAGGACAGACACTTTGCCATATCCCAAGCAAGCTAGCTCATTCTATCATCTAAGCAAGGTACATGATTCACATAACATAGCCTTCACTTGCAAAGCTTGGGGGATTCGAGCAACTGATCTGAATCAAGGAGTGGTATATGGGGTAAGAACAGATGAGACTGCAATGCATGAAATGCTGTGTAACAGGTTTGATTATGATGCGGTATTTGGAACTGCATTGAATCGGTTCTGTGTCCAGGCTGCTGTTGGCCATCCACTCACTGTATATGGTAAAGGAGGCCAGACTAGGGGCTTCCTTGACATCAGAGATACTGTGCAATGTGTTGAACTTGCCATTGCAAACCCGGCGAAACCTGGAGAGTTCCGAGTCTTCAATCAATTTACTGAGCAGTTTAAAGTGAGTGAACTTGCCAACCTTGTTACAAAAGCTGGTGAGAAGCTGGGCCTTGATGTGAAAACCATATCTGTGCCTAACCCAAGAGTGGAGGCAGAGGAGCATTACTACAATTGCAAGAACACTAAGCTAGTTGATCTGGGACTGAAACCACACTTCCTTTCAGATTCTCTCCTTGACTCACTGCTCAATTTCGCTATTCAGTACAAAGACCGTGTGGACACAAAACAAATTATGCCTAGTGTTTCTTGGAGAAAAATTGGGGCCAAAACAAAAACTGTTCCAGCCTAA 1434 0.4296 MAQLLSSSCSLTISSRNKPYLKPLNQCSTSFSIMVACNKSRLPFRRLSLQEQKPRRSSAVVHATAVSTSQEAPVQTSSGDPFKPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLDSLTPISSIQNRLQCWKSLTGKSIELYIGDICEFEFLSETFKSFEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVVGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEMLCNRFDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFKVSELANLVTKAGEKLGLDVKTISVPNPRVEAEEHYYNCKNTKLVDLGLKPHFLSDSLLDSLLNFAIQYKDRVDTKQIMPSVSWRKIGAKTKTVPA. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03907 477 CDD SQD1_like_SDR_e 86 466 - -
Seca2g03907 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
Seca2g03907 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 456 IPR036291 -
Seca2g03907 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 83 465 - -
Seca2g03907 477 Gene3D - 293 454 - -
Seca2g03907 477 Gene3D - 86 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03907 Seca-Chr2 120335629 120340648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03907 1 475 Acyl Lipid Metabolism Gene Families AT4G33030 78.914 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03907 K06118 - gmx:100805019 889.412