Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03896 ATGAAGCCACAGCTGCATCTCACAGCGGCCATCGTGGCAGTTATTGTCACTACTTGGTTTGCATATAACTACAGCGTCGAGCCATCCAACCAACAAAACGCTGTTTCCAAGCTATCGTCGCATTATGAGACTGTTCCAATTCAAAACGACGCCGTTGGACCAGAAAGCTTCGCCTTCGATCCGCATGGTGAAGGTCCTTACACTGGCGTTTCCGATGGAAGAATCATCAAATGGCACCGCACTCAGAATCGTTGGGTTAACTTTGCTGTTACTTCTTCACACAGGTGTGTGCCCTCTGACTCTGTATCTCACTCTTTTCCAATGCTCTGTTCGTATACATCACATGATGAGCATCCCAAGACAGAGCACATCTGTGGGCGCCCACTTGGGTTGTGCTTCAGCATACTATCGGGTGAACTTTATGTTGCTGATGCTTACAAGGGCCTAGTTGTTGTTGAGCCCAATGGTGGCACTGCTAGAAAAGTCATATCACATGTAGAAGGTGAACCCTTGGCGTTTACTAACAGTTTGGATATTGATCAGAGAACTGGAGCTGTGTACTTCACCAGCAGCAGTTCAAAATATGAGAGGAGGAACTACGTGTCTTTGATCCTAAGCAGAGATAACACAGGGAGGCTAATGAAATATGAACCACAAAGTGGACAAGTTAGCGTTCTTCTAAACAACCTCACGTTTGCAAATGGGGTAGCACTAAGCAAAGATGGTAACTACATTCTAATAGTAGAGACCACCAGCTGCAGAGTACTGAGGTATTGGCTTGAAACACCAAAAGCTGGAACCTTGGAAGTGTTTGCTGATCTACCAGGTTTCCCAGACAACATCAAACGGAGTCCAAGAGGGGGATTTTGGGTGGGCATTTACTCAAAAAGAGAAAAATTTATCCAATGGATTCTATCATATCCCTGGGTTGGTAAAGCTCTGCTTAGGCTTCCTTTGGACATCACTAAAACTTATTCATATTTGGCTAAGCTTAAAGGGAGTACTGGATTGGCAATTAGGCTCAGTGAGAAGGGTGATGTGTTGGAAATTTTTGAAGACAGAAGTAGAAATAGAGGGAAGTCTATCAGTGAAGTTGAGGAAAGAGATGGGATATTATGGGTGGGATCCATAGATGCACCCTTTGCTGCTAAGTATAGTTCTCTTGTAGCTCAAGGATAA 1179 0.4444 MKPQLHLTAAIVAVIVTTWFAYNYSVEPSNQQNAVSKLSSHYETVPIQNDAVGPESFAFDPHGEGPYTGVSDGRIIKWHRTQNRWVNFAVTSSHRCVPSDSVSHSFPMLCSYTSHDEHPKTEHICGRPLGLCFSILSGELYVADAYKGLVVVEPNGGTARKVISHVEGEPLAFTNSLDIDQRTGAVYFTSSSSKYERRNYVSLILSRDNTGRLMKYEPQSGQVSVLLNNLTFANGVALSKDGNYILIVETTSCRVLRYWLETPKAGTLEVFADLPGFPDNIKRSPRGGFWVGIYSKREKFIQWILSYPWVGKALLRLPLDITKTYSYLAKLKGSTGLAIRLSEKGDVLEIFEDRSRNRGKSISEVEERDGILWVGSIDAPFAAKYSSLVAQG. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03896 392 Pfam Strictosidine synthase-like, N-terminal 43 78 - -
Seca2g03896 392 Pfam Strictosidine synthase 175 262 IPR018119 GO:0009058|GO:0016844
Seca2g03896 392 Gene3D - 35 390 IPR011042 -
Seca2g03896 392 PANTHER STRICTOSIDINE SYNTHASE-RELATED 15 377 - -
Seca2g03896 392 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 39 388 - -
Seca2g03896 392 SUPERFAMILY Calcium-dependent phosphotriesterase 40 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03896 Seca-Chr2 119966198 119969794 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03896 - - mtr:11416127 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03896 2 119966198 119969794 Seca2g03896 2 119966198 119969794 ECH