Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03880 ATGGATGCCAAGATCGGAAGCATCTTCGAATCCATCGGAAACTTCTTCACCGGCGGCGATCAGATCCCTTGGTGCGACTGTGATGTCATCGCTGTCTTAACTATTTTGCATGTTTTGAAGGGCTGTGAGAGAGAAGTTGCTGAGGCTGCTAATGGTGACTCGGAGGATAGGAAAAATGAGAGCATAATGAGGTTGTCATGGGCACTTGTTCATTCAAAGCAAAAAGAAGATGTTCAGCGCGGGGTCGCCATGCTTGAAACTTCTTTGGGCAATGATAGAAGTCCTTTGCATCAAAGAGAGAAGCTTTATCTTCTGGCTGTTGGATTCTACAGGAGTAATGATTATCCTAGGAGTCGGCAGCTTGTGGAGCAGTGTTTAGAGATTGCACCTGATTGGAGGCAGGCACTGTCCCTCAAGAAAACAGTCGAAGATCGAATTGCCAAAGATGGTGTTATAGGAATTGGCATCACTGCAACAGCCGTGGGACTTATAGTTGGTGGCATTGCTGCAGCTTTGGCCCGGAAGGGTTGA 531 0.4727 MDAKIGSIFESIGNFFTGGDQIPWCDCDVIAVLTILHVLKGCEREVAEAANGDSEDRKNESIMRLSWALVHSKQKEDVQRGVAMLETSLGNDRSPLHQREKLYLLAVGFYRSNDYPRSRQLVEQCLEIAPDWRQALSLKKTVEDRIAKDGVIGIGITATAVGLIVGGIAAALARKG. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03880 176 Pfam Fis1 C-terminal tetratricopeptide repeat 99 151 IPR028061 -
Seca2g03880 176 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 6 172 IPR016543 GO:0000266
Seca2g03880 176 FunFam Mitochondrial fission 1 protein 24 176 - -
Seca2g03880 176 Gene3D Tetratricopeptide repeat domain 29 175 IPR011990 GO:0005515
Seca2g03880 176 CDD Fis1 33 150 IPR033745 -
Seca2g03880 176 Pfam Fis1 N-terminal tetratricopeptide repeat 60 89 IPR028058 -
Seca2g03880 176 SUPERFAMILY TPR-like 10 175 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03880 Seca-Chr2 119624933 119628961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03880 K17969 - gmx:100785425 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03880 2 119624933 119628961 Seca2g03880 2 119624933 119628961 ECH