Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03879 ATGGCAGAGCATTTTGTGAAACAGGCAAAGCAATATGCAGATGCAAGGCCAAGTTATCCTTCACAACTCTTCCAATTCATTGCTTCAAAAACTCCCTCTCACAACCTCGTTTGGGATGTCGCCACTGGAAGTGGCCAAGCTGCCAAATCTTTAGCTGCACTATACAATAATGTCATAGCCACAGATGCTAGTGAGAAGCAACTTGAATTTGCAACCAAGATTCCCAATGTGCAATACCAGCTTACTCCTTCAACTATGTCCATGGAAGAGCTTGAAAAATTGGTGGCACCTCAGGGAACCATAGACCTTGTGACCATAGCCCAAGCCCTCCACTGGTTTGATCTCCCAACCTTCTACCAACAAGTCAAGTGGATTCTCAAGAAACCTCATGGAGTCATTGCTGCTTGGTGTTACAATTTTCCTAGAATTAGTGATGCAGTGGACCCTGTCCTTGATCAATTTTATTTCTCTGATTTAAGTCCTTATTGGGACCCAGCTCGTAAATTGGTTGAAGACAATTATAGAAGCATTGATTTTCCATTTGAGCCAGTGGATGGAACTGATCACACTGGACCATTTGAGTTTGTGTCAGAGACTTTGATGGATTTGGATGATTTATTCACTTACATAAGATCAGGGTCAGCATATCAGACAGCAAAGGAGAAAGGATTGGAGCTTCTTGAGGAGGAGGTAGTTGAAAAATTTAAGCTTGCTTGGGGTGAAGATGGCAAAAAGGTTGCCAAGTTTCCAGTTAATCTGAGAATTGGAAGAGTAGAAATTGGAGGAAGAGAGATGGCAAAGCTTTTTGTGAAACAGGCAAAGCAATATGCAGATGTAAGACCAAGTTATCCTCCACACCTTTTCACATTCATCGCTTCAAAAACTCCCTCTCACGACTTCGCTTGGGACGTCGCCACCGGAAGCGGCCAAGCTGCCAAATCTTTAGCTACAGTGTACAAGAATGTTATAGCCACGGATGTTAGTGAGAAACAACTTGAATTTGCAACCAAGCTCCCTAATGTGCGTTACCAACATACCCCTTCAACCATGTCCATGGCAGAGCTTGAACAAAAAGTGGCACCTCAGGGAACCATAGACCTTGTGACCATAGCACAAGCCATCCACTGGTTTCACCTCCCAAACTTCTACCAACAAGTCAAGTGGGTTCTCAAGAAACCTCATGGAGTCATTGCTGCTTGGTGTTACCATATACCAAGATTTAGTGATGCAGTAGACCTTATCCTTGATCAATTATATTCCTCTGATGCAGGCCCTTATTGGGACCCATCAATTAAATTGATTGATAACAATTATAGAAGCATTGATTTTCCATTTGAGCCTGTGGATGGAGCTGATCACACAGGACCATTTGAGTTTGTGGCAGAAACTGTGATGGATTTGGATGATCTCTTGACTTTCATAAGAACATGGTCAGCATATCAGACAGCAAAGGAGAAAGGATTGGAGCTTCTTGGGGAGGATGTAGTTGAAAAATTTAAGCTTGCTTGGGGTGAAGATGGCCAGAAGGTTGCCAAGTTTCCAATTTATATGAGAATTGGAAGAGTAGGGGATGCCTGA 1578 0.4297 MAEHFVKQAKQYADARPSYPSQLFQFIASKTPSHNLVWDVATGSGQAAKSLAALYNNVIATDASEKQLEFATKIPNVQYQLTPSTMSMEELEKLVAPQGTIDLVTIAQALHWFDLPTFYQQVKWILKKPHGVIAAWCYNFPRISDAVDPVLDQFYFSDLSPYWDPARKLVEDNYRSIDFPFEPVDGTDHTGPFEFVSETLMDLDDLFTYIRSGSAYQTAKEKGLELLEEEVVEKFKLAWGEDGKKVAKFPVNLRIGRVEIGGREMAKLFVKQAKQYADVRPSYPPHLFTFIASKTPSHDFAWDVATGSGQAAKSLATVYKNVIATDVSEKQLEFATKLPNVRYQHTPSTMSMAELEQKVAPQGTIDLVTIAQAIHWFHLPNFYQQVKWVLKKPHGVIAAWCYHIPRFSDAVDLILDQLYSSDAGPYWDPSIKLIDNNYRSIDFPFEPVDGADHTGPFEFVAETVMDLDDLLTFIRTWSAYQTAKEKGLELLGEDVVEKFKLAWGEDGQKVAKFPIYMRIGRVGDA. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03879 525 Gene3D Vaccinia Virus protein VP39 4 257 IPR029063 -
Seca2g03879 525 Gene3D Vaccinia Virus protein VP39 269 521 IPR029063 -
Seca2g03879 525 CDD AdoMet_MTases 37 138 - -
Seca2g03879 525 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 181 IPR029063 -
Seca2g03879 525 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 264 428 IPR029063 -
Seca2g03879 525 Pfam Methyltransferase domain 39 128 IPR013216 GO:0008168
Seca2g03879 525 Pfam Methyltransferase domain 303 392 IPR013216 GO:0008168
Seca2g03879 525 CDD AdoMet_MTases 302 404 - -
Seca2g03879 525 PANTHER OS01G0307686 PROTEIN 265 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03879 Seca-Chr2 119615118 119621441 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03879 - - gmx:100784891 450.669