Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03860 ATGGAAACCACCACCTCACTCATGAGCTGTGTGCAACAACAACAACAAAGGAGGACAGTACTACCCTCCAAAAGAACCAAACCCAAAAAGAAAACCAACAAACCCATCAAGGTAGTTTACATATCCAACCCCATGAAGGTCAAGACTTGTGCTTCTAACTTCAGGGCCTTAGTGCAAGAACTCACCGGCCAGGATGCTGAATCTCCACCTGACCCATCAAGGTTTGAGGATCCTGATGGTGGTGGCGGCTGGCATCAGATGAAAAAGATTGGGAATGATGTTGAGAATATTGATGATCTTGTGGTGCCTCCAATAGTGGATCCTAATAATAATAGTAGTTATCAAGGGGAACAAGGCTCTTGTTCATTTGAAGAAAGTAGCTTTGACCCATTTGATGATGTTTTCACTCCTCAGATGGTAGAGAATATTTCCGCTCTGCTTCCAGCAAGTCTTTTCTATGAATCTCAGTGGTGA 474 0.4367 METTTSLMSCVQQQQQRRTVLPSKRTKPKKKTNKPIKVVYISNPMKVKTCASNFRALVQELTGQDAESPPDPSRFEDPDGGGGWHQMKKIGNDVENIDDLVVPPIVDPNNNSSYQGEQGSCSFEESSFDPFDDVFTPQMVENISALLPASLFYESQW. 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03860 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 8 155 IPR039335 GO:0051091
Seca2g03860 157 MobiDBLite consensus disorder prediction 1 21 - -
Seca2g03860 157 Pfam VQ motif 41 66 IPR008889 -
Seca2g03860 157 MobiDBLite consensus disorder prediction 61 88 - -
Seca2g03860 157 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03860 Seca-Chr2 118656080 118656553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03860 - - gmx:102661022 131.339