Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03853 ATGTTTTACCTCATTATATCTTTTGTCTCCTTTGTCATCCTTTCAAAGTCCTTTACCAGTAAGATACATTCATCAAGGGATAGTGGGACAAAACTAGTGTCAACCGGGTTTTGGGGGAATTTGTCAAGTTTGCTACTTTCTAGGCTCAAGACAGGAAGCATTCCTTTTAGTTTTTTTCAGTTTTCTCTTGACATGCCATTGAAAAAGAAGTGTTTAGTATCTTCTAAAGTTGAGAATGGGGAAGAGGAAAACAAGGTTTCTCTCTTGGATTTGCCTGATTTGCCATTGGAGTGTATCCTTGAGCACCTTTCACCAGCTGAATTATGCAATGTGGCAACAGTGTGCACATCTCTCAGGGATAGATGTGGAAGTGACTATTTATGGGAGAAACACTTGAAGAGGAAATGGGGTAGAGTGATTAGTGATGCTGCTTATAGACAATGGAAATTGCATGTAGCTTCCAGAAACAAAGACAAGGCCTCTAATCAGCACAATCAGAAAGGAATATTTGCTTTCCTTCATGGTTTTGGCCCCTTCCAATGGATTAAATCAAAATCAGAAAAAGGAATACTGTCTAGGAGCTCATTACCTGATGATTCAATTGCTGCTCTTTATCTTTCTCTTGAGAGTGGGAAATTTTGGTTCCCAGCTCAAGTCTATAACCGTGAGAATGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGATTCTAGAACTGACACTTTTGAAGCAAGGTACTCACCTCATGGGAGATGGACAACTGAGGAAAACATACAATGGGACAGGCTGAGAGTGCCACCAATTGACTCTTCTCCACATACACTTCATATCTCTGACTGTTTAGACGATTTAAAACCTGGAGATCATGTTGAGATCCAGTGGAGAAGAAATAAAGAGTTTCCTTATGGTATGTCTCATCCTTGCTGGTGGTATAGTGTCGTTGGTCATTTGGAAGCATGTCAAGGGCTTGGGAACCATTGCCATTGTGACAAAAACGATATGGTGATTTTGGAGTTCACTCAGTACACAGCTGGTTCTAGATGGAGACAAGCCATCATAAACAGGAAACATCATAGAGAACAAGGTAATGAAATAGAAGGTTTCTATGGGGGAATCAGGAAGTTGTATAGCAAGGAAGAAATCACAAGGTGGAAGAACCTCTGGCCAACCAAAATTGTGGAATAG 1200 0.4067 MFYLIISFVSFVILSKSFTSKIHSSRDSGTKLVSTGFWGNLSSLLLSRLKTGSIPFSFFQFSLDMPLKKKCLVSSKVENGEEENKVSLLDLPDLPLECILEHLSPAELCNVATVCTSLRDRCGSDYLWEKHLKRKWGRVISDAAYRQWKLHVASRNKDKASNQHNQKGIFAFLHGFGPFQWIKSKSEKGILSRSSLPDDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRTDTFEARYSPHGRWTTEENIQWDRLRVPPIDSSPHTLHISDCLDDLKPGDHVEIQWRRNKEFPYGMSHPCWWYSVVGHLEACQGLGNHCHCDKNDMVILEFTQYTAGSRWRQAIINRKHHREQGNEIEGFYGGIRKLYSKEEITRWKNLWPTKIVE. 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03853 399 Gene3D - 72 163 - -
Seca2g03853 399 SMART fbox_2 91 131 IPR001810 GO:0005515
Seca2g03853 399 SUPERFAMILY F-box domain 88 157 IPR036047 GO:0005515
Seca2g03853 399 Pfam F-box domain 88 130 IPR001810 GO:0005515
Seca2g03853 399 ProSiteProfiles F-box domain profile. 85 131 IPR001810 GO:0005515
Seca2g03853 399 PANTHER ESTS AU081301(E20138) 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03853 Seca-Chr2 118436091 118439745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03853 - - gmx:100778469 665.611