Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03838 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTCACAAGGGCTTTCATCGTCGCCTCGGCGCTTTCCACAATCTTCTTCGGGATCCAGGGCCGTTTCAACACTCTGGGGTTGTCTTATCAGGATATTTTTGGAAAGCTTCGCATTTGGAAGTTGATTATGTCTGTATTTTCCTTCTCATCAACACCAGAGTTGATGTTTGGACTGTATCTGCTATATTACTTCAGGGTCTTTGAGAGACAAATAGGTTCCAATAAATACTCAGTCTTTATTGTGTTCTCCATATTAAGTTCACTGCTCTTCGAGGTCCTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAACCTGGTCACTCCTGGACCTTATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCAGTATCAACACGGTTCCGTGTATTTGGTTTTCACTTCTCAGATAAATCATTCATATATCTAGCTGGTCTTCAGCTAATTTATTTTATTGTAGCTTCTTTTGTCATCATGGAAAAGATCCATCTTACCAGGGATGTGTGGCATCCTTGCTGGTTCCTTATACCGTTTGAATGTCTTTTACATCCGAAAAGCAAAGTTCCCAGAGTTGATCTCATCATTCTTTTCACGAATTTCGTTGCCATCTATGGGGAGTCCACGTGCAGCATCAACAAGGAATGTTGTGGGGAATGTACCATCCTACCCCACTCGTCAAATGGAGGCAAGTTTTACTTTATACCCAGAAACTATCCGGCTCCAATGCAATCTGCAGTAGAACCGTCAGAGGACTCAATCACTACCCTAGTTTCTATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAATGATGTCAATGTGGCCACAAACATCCTACTGGAGGCACAGTCCCACTAA 918 0.4303 MNGGPSGFTNAPVTRAFIVASALSTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILSSLLFEVLAVALLKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFGFHFSDKSFIYLAGLQLIYFIVASFVIMEKIHLTRDVWHPCWFLIPFECLLHPKSKVPRVDLIILFTNFVAIYGESTCSINKECCGECTILPHSSNGGKFYFIPRNYPAPMQSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03838 305 Gene3D - 250 304 - -
Seca2g03838 305 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 262 302 IPR015940 -
Seca2g03838 305 PANTHER RHOMBOID-RELATED PROTEIN 3 167 - -
Seca2g03838 305 SUPERFAMILY Rhomboid-like 11 168 IPR035952 -
Seca2g03838 305 Gene3D - 9 184 IPR035952 -
Seca2g03838 305 Pfam UBA/TS-N domain 264 299 IPR015940 -
Seca2g03838 305 SUPERFAMILY UBA-like 257 302 IPR009060 GO:0005515
Seca2g03838 305 SMART uba_6 264 301 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03838 Seca-Chr2 117911266 117918625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03838 K25216 - gmx:100805217 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03838 2 117911266 117918625 Seca2g03838 2 117911266 117918625 ECH