Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03824 ATGATAGTTGCACAAAGGAGTTCTCAACTTCTTAAAGGTATTCCTGACTTTGTAAAGATAGTGGAGGTTGGTCCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCTACTGATGTAAAAGTTGAATTGATAAAGCTACTAGTTTCTTCAGGGTTGTCTGTTGTTGAGGCGACAAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCTGATGCAAAGGATGTATTGTCAGCAATTCAAAATGTTAAAGGTGCTAGCTTTCCTGTCTTAACTCCAAACCTCAAAGGTTTTGAGACATCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCTAAAGCAAATCTCAATTGTGGCATTGAGGATAATCTTGCTCGTTGCCGTGATATTGCTTTAGCTTCTAGAAGCCTATCGATCCCAGTCCGTGGATACATATCATGTGTTGTTGGATGTCCTCTGGAAGGAAAAATTGCTCCTGCGAAAGTTGCATACGTGGCAAAATCACTTTATGAGATGGGGTGCTCGGAGATTTCACTAGGGGATACAATTGGTGTTGGCACACCTGGCACAGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTTCCAATTGACAAGCTTGCTGTCCACTTCCATGATACGTATGGTCAGGCACTTTCAAATACACTAATTTCACTGCAGATGGGGATCAGCACTGTAGATTCATCTGTCTCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTTGCCACTGAGGATGTTGTTTACATGCTGAATGGACTTGGAGTGAAAACCAATGTAGACCTTGGAAAACTTATGCTAGCTGGGGATTTCATCTGCAAACATTTAGGACGTGCATCTGGTTCAAAAGCTGCAACTGCCTTGAGTAAAGTTACAAATCATGCCTCCAAACTGTGA 954 0.4277 MIVAQRSSQLLKGIPDFVKIVEVGPRDGLQNEKVIVPTDVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLSAIQNVKGASFPVLTPNLKGFETSVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIALASRSLSIPVRGYISCVVGCPLEGKIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNTLISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALSKVTNHASKL. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03824 317 Gene3D Aldolase class I 12 310 IPR013785 -
Seca2g03824 317 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 7 311 IPR043594 GO:0016833
Seca2g03824 317 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 12 310 - -
Seca2g03824 317 ProSiteProfiles Pyruvate carboxyltransferase domain. 18 285 IPR000891 GO:0003824
Seca2g03824 317 SUPERFAMILY Aldolase 14 308 - -
Seca2g03824 317 Pfam HMGL-like 18 290 IPR000891 GO:0003824
Seca2g03824 317 CDD DRE_TIM_HMGL 20 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03824 Seca-Chr2 117625429 117638429 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03824 K01640 - gmx:100801507 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03824 2 117625429 117638429 Seca2g03824 2 117625429 117638429 ECH