Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03792 ATGGAGCTGGATATTCAGAGGTTTATGAATAATGCTGATCAGCAGCATTTTGAGTTCCAACATTTCCCTTCTTCTTATCTTCGACTGGCTGCACATCGTGTTGCTCAACACTATGGTTTGCAAACAATGGTTCAAGATAATGGCTTGGATGGCCAGGGAAGTAAGATTCTGGTGAGAAAGTTAGCAGAAAGCAAGTATCCCATGGTCCGCTTATCTGAAATACCTGTAAAACAGTTGGAAAATGATAAATCTGAGCTGAAAAAAATTGTCCTTAGAACTAGACCTAATAAATCTAGTTTGAATGAAACTAATGAAGCTGGGATGAAAGGCAACCCTCTGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGGGCGCGAGCACGCATCTTCAGTAGCTCTAGAAGCTCTGATTCAGGTGATACCCCATCCACAGTCCCAGTGGATGGGAAAATTTCTTTTATGAGCAAGGATGAGAATGAAACTAGCAAAAACCCCATGGCTGATTCAGAAAGATGTGCTAGTGTCAGGGATTCTAGTTCTACTCGAGTTGCCATTTTCAGAGATAGGGAAAAGGATCGAAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAATATTTCAACCTCTGCCATTAACTTGGTGCCTTTTAATCTGCCAAAAGCTCAACCTTCATTTGCCCAATATGACAATACATTTAATCAGTTGGGTCAGATGCCACAAACTCAGGCTTCACTTGGCTATGGACCTCCTTCAAGTCCATTGATGAGTCCTTTTGGTGCTGCGGGATTGAATCAGACATCTAGAGATGGTGCTTACCTACAGTGGCCAAGTGCTGCAATGATGTATGCACATTCGTATGACCAATTTAGACATGCTGTTTACCAGGCTCCATTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAGAACTACTAG 948 0.4251 MELDIQRFMNNADQQHFEFQHFPSSYLRLAAHRVAQHYGLQTMVQDNGLDGQGSKILVRKLAESKYPMVRLSEIPVKQLENDKSELKKIVLRTRPNKSSLNETNEAGMKGNPLRSVEERKEEYDRARARIFSSSRSSDSGDTPSTVPVDGKISFMSKDENETSKNPMADSERCASVRDSSSTRVAIFRDREKDRSDPDYDRSYGRYARNISTSAINLVPFNLPKAQPSFAQYDNTFNQLGQMPQTQASLGYGPPSSPLMSPFGAAGLNQTSRDGAYLQWPSAAMMYAHSYDQFRHAVYQAPFGQQPLSFDYSQNY. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03792 315 CDD R3H_encore_like 1 60 - -
Seca2g03792 315 MobiDBLite consensus disorder prediction 132 146 - -
Seca2g03792 315 Pfam SUZ domain 87 134 IPR024771 -
Seca2g03792 315 Pfam R3H domain 1 48 IPR001374 GO:0003676
Seca2g03792 315 ProSiteProfiles SUZ domain profile. 65 135 IPR024771 -
Seca2g03792 315 MobiDBLite consensus disorder prediction 183 203 - -
Seca2g03792 315 SUPERFAMILY R3H domain 1 82 IPR036867 GO:0003676
Seca2g03792 315 MobiDBLite consensus disorder prediction 92 203 - -
Seca2g03792 315 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 1 302 - -
Seca2g03792 315 Gene3D - 1 96 IPR036867 GO:0003676
Seca2g03792 315 MobiDBLite consensus disorder prediction 94 108 - -
Seca2g03792 315 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03792 Seca-Chr2 117106680 117109896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03792 - - gmx:100814835 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03792 2 117106680 117109896 Seca2g03792 2 117106680 117109896 ECH