Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03754 ATGACTGCTGAGACCCAAGAAGAGCTCCTTGCTGCACAGCTCGAACAGCAAAAGATCCATCATGATGAGCCTGTAGTTGAGGATGACGATGAAGATGAAGAGGAGGATGACGATGAAGATGAGGAAGATGACAATGCTGAAGCTCATTGGGGTTTGTGTTCTATTGCAGGGCAAGAAGGTGACATATCTGGTCGCTCCAAGCAGACCAGAAGTGAGAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGTGTGACAGTCAAGAAGAGCAAGAATATCCTGTTCGTTATCTCAAAACCAGATGTCTTTAAAAGCCCAACTTCTGACACATACATTATATTTGGGGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAATTCAAGGCTCCTAATTTGAGCAATGTTGGCTTGAAGCCTGAATCATCTGCTACTGCTCAGGATGATGAGGATGTTGATGAGACTGATGTGGATCCCAAGGATATAGAGTTGGTGATGACTCAAGCTGGTGTGACAAGATCAAGAGCTGTTAAAGCTCTCAAAGCTGCCAATGGCGACATTGTTGCTGCCATTATGGAGCTAACCAATTGA 633 0.4502 MTAETQEELLAAQLEQQKIHHDEPVVEDDDEDEEEDDDEDEEDDNAEAHWGLCSIAGQEGDISGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGLKPESSATAQDDEDVDETDVDPKDIELVMTQAGVTRSRAVKALKAANGDIVAAIMELTN. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03754 210 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 79 131 - -
Seca2g03754 210 Gene3D - 78 131 IPR038187 -
Seca2g03754 210 Pfam NAC domain 72 127 IPR002715 -
Seca2g03754 210 SMART NAC_2 72 128 IPR002715 -
Seca2g03754 210 Gene3D - 170 208 - -
Seca2g03754 210 Pfam HYPK UBA domain 171 209 IPR044034 -
Seca2g03754 210 MobiDBLite consensus disorder prediction 1 78 - -
Seca2g03754 210 MobiDBLite consensus disorder prediction 145 172 - -
Seca2g03754 210 CDD UBA_NAC_euk 173 209 - -
Seca2g03754 210 CDD NAC_NACA 83 130 - -
Seca2g03754 210 ProSiteProfiles NAC A/B domain profile. 69 134 IPR002715 -
Seca2g03754 210 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 20 209 IPR016641 GO:0005854
Seca2g03754 210 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03754 Seca-Chr2 116111616 116114349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03754 K03626 - gmx:100791967 277.715