Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03748 ATGAACCTGTTATCAAGCTTCAGATACAGGATCTTCCAATCACCTTCTATCTCCTTCTCACCCTTTCTCCTCTTCAACCAAAGAAGATGGAAAAAACCCATCGTTTCTGCCCAAACCCGTTTGGAGGACAGGGTGAGGGACCCCCACCTCGACAACTTCATGACCCACCTCAAAAAACTCAAACTTGTCCTCAAAATTCACCACCTTATGTCGAATCGCAAACGTGGTCCTTTCGTTTCCCTTCAGCTCATGTCCCGTTGGAGAAACATCCTTGGACTCAACATCACCGTTGGATCCTTTCTCCACAAATACCCTCACGTTTTCGAGGTGTTCCAGCACCCTCTGAGGAGGAACATGTGCTGCAGAATCACGAGGAAGATGAAGGAGTTGATCCAGCTGGAAGAGGTTGTTGTGAAGCAGCAGGAGCTTGAGGCTGTGAAGAGGGTGAAGAAGTTGCTTATGATGTCTATGAATGGTACCCTTCATGTGCATGCATTGAGGTTAATCAGAAGAGAACTGGGGCTTCCTCAGGATTTCCGAGACTCCATTCTTGGCAAGTATAGTGGTGATTTCAGGTTGGTTGATTTGGAGGTTGTGGCATTGGTTGGTTGGGATGATGAATTGGGAGTGGCTCATGTTGAGAAATGGAGGGAGAAAGAGTATACAGAGAAGTGGTTGAGTGAGTTTGAGACTAAGTTTGCATTTCCTATCAATTTCCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAAAAGTTGAAGAATTGGCAAAGACTTCCTTATACAAAGCCTTATGAGAGGAAAGAGGCAATTCGGGTTAGAACTTGTGGTGGGGTCCAGCGCTATGAGAAGAGGGCTGTTGCTGTTCTTCATGAACTGTTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAATTGGCTCACTTTAGGAGGGATTTTGCTATTGAAGTTAATGTGCGGGAACTACTGCTATGTCACCCGGGAATTTTTTACATATCTACTAAAGGAAGTACTCAAACTGTTTTTCTTAGGGAGGCATATAGAAAAGGGGGCTTGATTGAGCCTAATCCTGTGTATACATCTCGTAGGAATATGTTAGACCTTGTATTATTTGGGCGTAGGAAAACTAAACAATTGCTAGCTTGTGATGAATCTAAGGAAGAGAGCAATATTGTTATCTATGATGTAGATAAGGGGGGTAAAAGAGAGGGAGATTGGGTGATTCCATTTCTAGAGAGTTGTGAGGAGAATAGATCCCCATGA 1266 0.44 MNLLSSFRYRIFQSPSISFSPFLLFNQRRWKKPIVSAQTRLEDRVRDPHLDNFMTHLKKLKLVLKIHHLMSNRKRGPFVSLQLMSRWRNILGLNITVGSFLHKYPHVFEVFQHPLRRNMCCRITRKMKELIQLEEVVVKQQELEAVKRVKKLLMMSMNGTLHVHALRLIRRELGLPQDFRDSILGKYSGDFRLVDLEVVALVGWDDELGVAHVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEAIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLCHPGIFYISTKGSTQTVFLREAYRKGGLIEPNPVYTSRRNMLDLVLFGRRKTKQLLACDESKEESNIVIYDVDKGGKREGDWVIPFLESCEENRSP. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03748 421 Pfam Plant organelle RNA recognition domain 45 374 IPR021099 GO:0003723
Seca2g03748 421 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 389 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03748 Seca-Chr2 115718897 115720162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03748 - - gmx:100789857 661.373