Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03747 ATGGCTTCCTTCCCTCCTCCTGGTTCTCTCACCCTCTGCGAACTCAACCGTGACCTAATCACCGTCGACGCTCTCTCCGACGATCGAGCCAACAACACTTACGGAAAGCTTCTCGGATTGGTATTCAGTCCGGTGCCGTTTCAACCTCCGGCGCCGGCTCTCGACAACGATGCTTCCGAACAGGAAGGAACAACAACCACAACCGCCGGAGAAATCGTTCAGAGGAAAGGTCCGGTGGCACTCTTGCAAGGCCTTGTGAACGAGTGTCTCAGACGCCTCTTTTACCCTGACGATGTGCATTTGTTGCCTGAGGTTGATCTTCAAGGAGTAAGCTGGCATCTTAATAAGCACATAATTGCTTTTATATCTGGCCCAACCCAAGTTTTAGTTCGTGATTACGAAGACTCGGATGGGAAGGATCCGATTATTTTGACCAGTGAGTCTCAGAGAGATGTTAGAGTTCTAGAGTGGAGACCCAATGGTGGAAGGATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATATGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGCGCTGCTTCCTTCTTAGGAAGTTTATCTAGAGGCTCAGGAATTCGGTATATCCTGGTGGATTTTCTTCGTAGTCAAAATGATGAGCATGTTAGCGCCCTTTCATGGAGCCCAGATGGAAGATATCCTCATAAATGTCAAAATGTCTTTTTTGATTTTATTGCATGTTTCCCAAATATGAAAATCGCTGTTCTCATTCTTTCTTTGCAAGAGCTTCTGTTGTGTGATTGTGTGGGAACACCAATTAGACGGGGATTAGGAGGTATATCGATGTTGAAGTGGTCACCAACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTCTGGGAGACGAACACATGGACATCAGAGCAATGGTCATCAACTAGTGGTTTTGTCAAGTGTGCAACATGGGATCCAGATGGGCGTATGATACTGCTTGCATTTTCTGAATCATCAACTTTGGGATCTGTTCACTTTGCATCAAAGCCTCCCTCATTAGATGCACATCTGTTACCTGTTGATTTGCCAGAGATATTATCATTGACTGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGATATTTATAGGGGTCTGATCGCCATATATGATACAAGAAGGTCCCCTCTGATATCTACATCATTAATTGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCGTTTTCATTTCACGGAAAGTTTAAACAGGGACCATTGCTTTCTGTGGTAATGTTGGAGCAGTGGATTCTGTTGCACTTACCCCCTTTTATTTCGTTCTCATATGCTTCCATAACGAAGACTTCTGCGAGATTTTGTTGCAATTTGGAGCAAGCTGACTTTGATGTTACCACCATTTGTTCAATGTTTTAG 1482 0.4433 MASFPPPGSLTLCELNRDLITVDALSDDRANNTYGKLLGLVFSPVPFQPPAPALDNDASEQEGTTTTTAGEIVQRKGPVALLQGLVNECLRRLFYPDDVHLLPEVDLQGVSWHLNKHIIAFISGPTQVLVRDYEDSDGKDPIILTSESQRDVRVLEWRPNGGRMLAVGCKGGICIWAASYPGNAASVRSGAASFLGSLSRGSGIRYILVDFLRSQNDEHVSALSWSPDGRYPHKCQNVFFDFIACFPNMKIAVLILSLQELLLCDCVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKCATWDPDGRMILLAFSESSTLGSVHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDIYRGLIAIYDTRRSPLISTSLIGFIRGPGDNPKPISFSFHGKFKQGPLLSVVMLEQWILLHLPPFISFSYASITKTSARFCCNLEQADFDVTTICSMF. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03747 493 SMART WD40_4 267 303 IPR001680 GO:0005515
Seca2g03747 493 SMART WD40_4 139 177 IPR001680 GO:0005515
Seca2g03747 493 SMART WD40_4 361 405 IPR001680 GO:0005515
Seca2g03747 493 Gene3D - 89 235 IPR015943 GO:0005515
Seca2g03747 493 FunFam Aladin isoform A 212 454 - -
Seca2g03747 493 SUPERFAMILY WD40 repeat-like 108 436 IPR036322 GO:0005515
Seca2g03747 493 Gene3D - 259 438 IPR015943 GO:0005515
Seca2g03747 493 PANTHER ALADIN/ADRACALIN/AAAS 2 453 IPR045139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03747 Seca-Chr2 115676745 115685205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03747 K14320 - gmx:100808599 726.857