Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03743 ATGATTACTTTTTCAAAGGCTAATTGCAGTATTCTTTGGCTCTACTTCATTGTAGTGGCTTCTCTTACTTCTCAATACTATGCTGCTACAAACAATACTTCAACATTCATTATAGATGCTTCTCAAGCATCTGGAAGGCCAATCCCCGACACTCTTTTAGGAATATTTTTTGAGGAAATCAATCATGCTGGTGCTGGGGGATTATGGGCAGAGCTTGTGAACAACAGAGGTTTTGAAGCCGGGGGCACGCAAGTTCCATCAAATTTTGCCCCATGGAAAATGGTTGGAACTGAATCATCCGTTATAATACAAACCGAACTGAGTTCTTGCTTTGAACGCAATAAGGTTGCATTAAGAATGGATGTGCTTTGTGACAATGATGAGTGCCCCTCTGACGGTGTTGGTATCTCTAACCCAGGCTATTGGGGCATGAATATTGAGAAAGGGAAGGAATACAATGTTGTCTTCTTTGTTCGTTCAACGGGACGACTAGAAATGACAGTATCATTCAAAAATGCAAATGGTGGAGAGGTATTGGCTACTACAAATACAAATATCAAATCCTGCAGAGCTTTTAATTGGAAAAGGATAGAGACTACATTGGTAGCCAATGCATCAAGTTCTAATGCAACTCTTCATTTAACAACAACCACAAAAGGAATAATATGGTTGGACCAAGTGTCAGCTATGCCCGCGGATACATATAATGGACATGGTTTCCGAAGTGACTTGGTCCAGATGATGATAGATTTGAAACCAGCTTTTCTCAGATTTCCAGGTGGTTGTTTCATTGAAGGACAAACCCTAAGAAATGCATTCCGATGGAAAGATAGTGTTGGACCCTGGTATCAGAGACCTGGCCACTTTGGTGATGTATGGAGTTACTGGACAGACTATGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCAATATGGGTATTTAACAACGGAATCAGTCATACCGATGAAATTGAAACGAGCATCATCACACCTTTTGTACAAGAAACACTTGATGGGATTGAGTTTGCTAGAGGTCCAGCCACTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGGCACACTGAGCCTTTTGACCTAAAATATGTTGCTATTGGAAATGAAGATTGCGGAAAGAAATACTACCAAGGAAATTACCTAGCATTCTACAATGCAATACGAGCTGCTTATCCAGATATTCAAATTATTTCAAACTGTGACGCATCTTCCAAGCCATTACCTCACCCCGCTGATTTGTATGATTATCATACTTATCCTTATCAAGCTCGGAACATGTTTAATAACGCTCATGCGTTTGATAAGACACCACGCAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGACAAACAAGCCAAGTATGGAACCCTTTTGGGAGGCGTGTCTGAAGCTGGATTCCTTATTGGATTAGAAAAAAATAGTGATCATGTGGCAATGGCTGCCTATGCACCACTTTTTACAAATGCAAATGACAGGAAGTGGAATCCGGATGCAATTGTCTTCAATTCCAATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAATACATGTTTAAAGAGTCAAATGGAGCAACGTTCCTCAAATCACAACTTCAAACACCTGATCCTTCCTCATTTGCTGCATCTGCAATTCTTTGGCAAAATCCTCAGGATAATAAAACTTACTTAAAGATAAAGGTTGCAAACTTGGAGAACAGTGAGGTGAATCTCAAGATTTCTATTCAAGGATTTACAACCTCGAAAATTGGGGCTACAAAGACTGTGCTCACATCTGGAAATCAAATGGATGAGAATAGCTTCTCACAACCAAGAAAGGTGTCACCACAACAAAGCCCACTTCAGAATGCTGGCAATGAGATGAATGTCATAATCCCTCCAGTTTCAGTGACAGTATTTGATTTGTTAAAAAACTAA 1962 0.4042 MITFSKANCSILWLYFIVVASLTSQYYAATNNTSTFIIDASQASGRPIPDTLLGIFFEEINHAGAGGLWAELVNNRGFEAGGTQVPSNFAPWKMVGTESSVIIQTELSSCFERNKVALRMDVLCDNDECPSDGVGISNPGYWGMNIEKGKEYNVVFFVRSTGRLEMTVSFKNANGGEVLATTNTNIKSCRAFNWKRIETTLVANASSSNATLHLTTTTKGIIWLDQVSAMPADTYNGHGFRSDLVQMMIDLKPAFLRFPGGCFIEGQTLRNAFRWKDSVGPWYQRPGHFGDVWSYWTDYGFGYFEGLQLAEDIGARPIWVFNNGISHTDEIETSIITPFVQETLDGIEFARGPATSKWGSLRASMGHTEPFDLKYVAIGNEDCGKKYYQGNYLAFYNAIRAAYPDIQIISNCDASSKPLPHPADLYDYHTYPYQARNMFNNAHAFDKTPRNGPKAFVSEYALIGDKQAKYGTLLGGVSEAGFLIGLEKNSDHVAMAAYAPLFTNANDRKWNPDAIVFNSNQVYGTPSYWVQYMFKESNGATFLKSQLQTPDPSSFAASAILWQNPQDNKTYLKIKVANLENSEVNLKISIQGFTTSKIGATKTVLTSGNQMDENSFSQPRKVSPQQSPLQNAGNEMNVIIPPVSVTVFDLLKN. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03743 653 SUPERFAMILY (Trans)glycosidases 209 542 IPR017853 -
Seca2g03743 653 Gene3D - 534 650 IPR013780 -
Seca2g03743 653 SUPERFAMILY Glycosyl hydrolase domain 525 649 - -
Seca2g03743 653 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 9 651 - -
Seca2g03743 653 Gene3D Glycosidases 211 533 - -
Seca2g03743 653 MobiDBLite consensus disorder prediction 609 635 - -
Seca2g03743 653 FunFam Alpha-L-arabinofuranosidase 1 227 535 - -
Seca2g03743 653 Pfam Alpha-L-arabinofuranosidase C-terminal domain 459 644 IPR010720 GO:0046373|GO:0046556
Seca2g03743 653 SMART alpha_l_af_c 458 644 IPR010720 GO:0046373|GO:0046556
Seca2g03743 653 MobiDBLite consensus disorder prediction 609 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03743 Seca-Chr2 115564610 115573933 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03743 35 652 Glycoside Hydrolase AT3G10740 62.802 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03743 K01209 - gmx:100780771 1031.55