Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03740 ATGAATGTGCATGCATGGTACTTAGAAAAGAAAAGGAGAGACGGCATGGAGATTAATCATGCTGGAGCTGGGGGATTGTGGGCAGAACTTGTGAGCAATAGAGGTTTTGAAGCTGGAGGCACAAATAATGCAACGTTAAATATTCATCCTTGGTCAGTTATTGGAAAAGAATCATCAATTTATGTATCAACTGATCTTACCTCTTGCTTTGAGCGTAACAAAGTTGCATTGCGTATGGAGGTGCTTTGTGGTGGCCACAAACTACCTTGTCCATCTACTGGCGTTGGTATCTCTAACCCAGGTTACTGGGGCATGAATATTGAGCAAGGGAAGAAGTATAAAGTGGTGTACCATGTTAAATCAATAGGAGTGATTGATTTTCAAATTTCATTCATGGGAGCTGATGGTATAAAATTGGCATCAAGTACTACCAGGCATGTTAGTAATATTACAAAATGGAGGAGGGTGGAGACTATACTTGAAGCTAATGCAACAAATCATAATTCAAGCCTTCAAATAACAACAACCACCAAAGGGATTTACTGGTTAGACCAGGTGTCAGCTATGCCATTGGATACTTACAAGGATCATGGCTTCCGAAATGACCTTTTTCAAATGGTGGCAAATTTGAAACCAAAATTTCTCAGGTTTCCGGCGGCAGCAAGCACAACGAAGCAACAGGACCAACAATACTTGAAGCTCCATTATAGGAAATCTCTTAACTTGCATGACCAATTCGAAATGGCAACTATGGAGCAACGGGAGTTTGATGAGAGTGGATGTTATGTTGAAGGTTATATTTTGAAAAACGCATTTCACTGGAAAGATACTATTGGGCCATGGGAAGAGAGACCTGGGCACTTTAATGATATGTGGAACTATTGGAGTGATGATGGACTTGGTTATTTAGAGTATCTCCAAGTTGGTATCGACCATCATGATGAGGTTAATACATTAGCTATTTCACTTTATGTGCAAGATGCCCTTGATGGCATTGAGTTTGCAAGAGGAAATTACCTTAAGTTCTATGAGGCTATTAGATTTTCCTATCCAGATATTCAGATTATCTCAAATTGTGATGGTTCTGTAAAACCATTAAATCACCCAGCTGATCTGTTTGAGTTTCATATTTATACAAATTCCAGGGACATGTTTTCTAAGTCTACAAAGTTTGATAACACACCACGATCTGGTCCAAAGGCTTTTGTTAGTGAATATGCTGTTTGGAAGGAAGATGCTGCAAATGGAAGCCTTTTGTCAGCTGTGGCTGAAGCTGCATTTCTAATTGGACTGGAAAAGAACAGGTGGATGCCGGATGCAATTGTGTTTGACTCTTATCAGCTTTATGGGACTCCTAGCTATTGGGTGCAACAACTTTTTAAAGAATCTAGTGGAGCAACATTTCTTAACACAACACTCATAACTACTTCATCTAATTCACTCATTGCATCTGCAATCAATTGGCAAAATTTTACTAATAAGAAAAATTACCTAAGAATAAAGGTAGTTAATTTTGGAGCTACCATTGAGAACCTTAACATTTCTGTAAATGGATTGGACTCAAATGTGCAAAAAATTGGTTCAACAAAGACGGTGTTCACATCCACCAATGTGATGGATGAGAATTCCTTCTTAGAGCCGAATAAGGTGGTGCCACACCAAATTTCACTTGAGAAGGCTAACAAAAACCTGAATGTCACACTCTCTGCTTATTCAGTGACATCATTTGATTTGTTGATATAA 1743 0.3873 MNVHAWYLEKKRRDGMEINHAGAGGLWAELVSNRGFEAGGTNNATLNIHPWSVIGKESSIYVSTDLTSCFERNKVALRMEVLCGGHKLPCPSTGVGISNPGYWGMNIEQGKKYKVVYHVKSIGVIDFQISFMGADGIKLASSTTRHVSNITKWRRVETILEANATNHNSSLQITTTTKGIYWLDQVSAMPLDTYKDHGFRNDLFQMVANLKPKFLRFPAAASTTKQQDQQYLKLHYRKSLNLHDQFEMATMEQREFDESGCYVEGYILKNAFHWKDTIGPWEERPGHFNDMWNYWSDDGLGYLEYLQVGIDHHDEVNTLAISLYVQDALDGIEFARGNYLKFYEAIRFSYPDIQIISNCDGSVKPLNHPADLFEFHIYTNSRDMFSKSTKFDNTPRSGPKAFVSEYAVWKEDAANGSLLSAVAEAAFLIGLEKNRWMPDAIVFDSYQLYGTPSYWVQQLFKESSGATFLNTTLITTSSNSLIASAINWQNFTNKKNYLRIKVVNFGATIENLNISVNGLDSNVQKIGSTKTVFTSTNVMDENSFLEPNKVVPHQISLEKANKNLNVTLSAYSVTSFDLLI. 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03740 580 SMART alpha_l_af_c 404 572 IPR010720 GO:0046373|GO:0046556
Seca2g03740 580 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 17 338 - -
Seca2g03740 580 FunFam Alpha-L-arabinofuranosidase 1 461 579 - -
Seca2g03740 580 Gene3D - 28 198 - -
Seca2g03740 580 SUPERFAMILY (Trans)glycosidases 169 218 IPR017853 -
Seca2g03740 580 Pfam Alpha-L-arabinofuranosidase C-terminal domain 435 572 IPR010720 GO:0046373|GO:0046556
Seca2g03740 580 SUPERFAMILY (Trans)glycosidases 260 468 IPR017853 -
Seca2g03740 580 Gene3D - 460 578 IPR013780 -
Seca2g03740 580 Gene3D Glycosidases 338 459 - -
Seca2g03740 580 Gene3D Glycosidases 258 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03740 Seca-Chr2 115432956 115441351 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03740 17 579 Glycoside Hydrolase AT3G10740 52.119 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03740 K01209 - gmx:100787734 702.975