Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03725 ATGGAAAGAGCAACATCCTTGAAAACCTTTCATACACCAACCCTGAGAGACAGAGATGCATCATTCTCATCATATCTCATACCTGAAAAGCCAATCACTTGCCAACCACATCATCATAATCATCACACCACCACTCGATGTAGAAGCGCTCTTGATGACTCCACCTCTGAGCTTAGCATATTTGATGCCCACAAGTACTTCAACGAAGTGACCAACAATGACATCCACAAAGTCACCATCAGCAGCAGCAACAGTAGAGTTTCTCCAGTGGTGGTCAACATGGACAATGAACGCATTAATTCAGAGACCACAAGATACTCCTCTGCTTCATCCTCAGTGGATGGCTATGCTGCCAACATCAGAAACTACAGAGCACGTTCCTTCCATGCTGCTACACCAACAGCTTCCTCAGAAGCAAGTTGGAACAGTCAACAAGGTTTACTATCTCACCCTCCAGGTGCAATCTCAGTGTCCATGAAAAACCCCCCAAATCCAAACCCCAACAATCTCAACAACAACAACCTCAAAGCATCAATTTCCAAACCTATATGGCTTTTCAGGAGAAGATGTCCATGCACGGGTAAAAAATCAGTACAAGTCAAGGAAAAAAAGACAACGCCAGAACCCAAAACACCAACCCCACCACCACCACTACCACAGCCACAATCAGCAACACAAGACCATGAAAATAGAATGAACATGGAAACAAATCAAACAACCAAGCATGTTCATAATCATATCACAGTCACACCTAATAACAATTGGGTAAATCAAACACCAAACCTTGTTGCCACCAAGTTGGTAACCACTTTAAGAGTACCCTTCAACGATGGTTTCACTTTCCCCGTGCTAAACCCACCCACAACGAAACTCCGCATCCAAAACGGCGTCGTTGAGGAAGATCCTCCGCGAGATTCCTTGGAAGTGTTCCGTCCACCCGACGAAGAACCTAAGCCAATCAATTTCCCCTTCCCGCCGGCCAATTCACGCGGCGTCGCCGTCGTCGAAGACGACGGCGACGGAGCAAGCGACGCTAGCTCCGATTTGTTCGAGATCGAGAGCTTCTCCACCGCAACGCAATCGACGTACCCTATGATTTATCGCCGGAGCAGCAGGGACTCGTTCGACGAGGGTTCAGCGACGCCGGCGATGACGGAGTGCTACGAGCCGAGCGAGGCGAGCATCGAGTGGAGCGTGACAACCGCGGAGGGGTATGAAGAAAGCATAGCCGGCGGCGGAGGAGGTGTGACGGCGACGGCGGAGCAGTTGAAGAGGAAAGGTGGGAATGGGTTGTTGGTGAGCTGTCGGTGTGAGAAAGCGGTTAGTGTGGGGCCACAACCGGTGAAATGTGGGGCCACAGGAACATCTTGGAGACATGTGAGTGTGAATGGTGGTGGTGGTAACAGTAGTAGGGTAGGGAGTGTAAATAAGCCACCCCTTGCAGCAAGGTCTAACCGCAGCACACCTCGTGTGTCTCTTGCTTTTGCGACATAG 1494 0.498 MERATSLKTFHTPTLRDRDASFSSYLIPEKPITCQPHHHNHHTTTRCRSALDDSTSELSIFDAHKYFNEVTNNDIHKVTISSSNSRVSPVVVNMDNERINSETTRYSSASSSVDGYAANIRNYRARSFHAATPTASSEASWNSQQGLLSHPPGAISVSMKNPPNPNPNNLNNNNLKASISKPIWLFRRRCPCTGKKSVQVKEKKTTPEPKTPTPPPPLPQPQSATQDHENRMNMETNQTTKHVHNHITVTPNNNWVNQTPNLVATKLVTTLRVPFNDGFTFPVLNPPTTKLRIQNGVVEEDPPRDSLEVFRPPDEEPKPINFPFPPANSRGVAVVEDDGDGASDASSDLFEIESFSTATQSTYPMIYRRSSRDSFDEGSATPAMTECYEPSEASIEWSVTTAEGYEESIAGGGGGVTATAEQLKRKGGNGLLVSCRCEKAVSVGPQPVKCGATGTSWRHVSVNGGGGNSSRVGSVNKPPLAARSNRSTPRVSLAFAT. 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03725 497 MobiDBLite consensus disorder prediction 152 174 - -
Seca2g03725 497 MobiDBLite consensus disorder prediction 195 228 - -
Seca2g03725 497 MobiDBLite consensus disorder prediction 461 497 - -
Seca2g03725 497 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 14 459 IPR039615 GO:0009638
Seca2g03725 497 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03725 Seca-Chr2 115161458 115162951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03725 - - tpra:123889734 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03725 2 115161458 115162951 Seca2g03725 2 115161458 115162951 ECH
Seca2g03725 2 115161458 115162951 Seca10g02241 10 26040684 26041850 PCT