Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03673 ATGGCCACCGTCCTCAGAACTTCCACCTTCCGGCCACCGCCTCCGTTGCGCACCTCCGCCTCCCCTTCCAAGTCTCCGAAGCCCTCATTTGTCGCCGTTGGACAAAGCAATACCTGCAGGAGGAGGAGGCCGTCATTCCTCACTTCTCTGCGGTTCCCTTCCATTCCCTCCCTGCGGTTCGTCAAGTTTGTACCCTTTGCTTTTGACGGGGACTCCGAGGCCCCACAAGTTCAAGAACCCGAGGTTCAGGTTCTGGACTCTTCAGATGGTGCTATTGGTGCAGAGGATAGTACTTGTGATAATGAGTTTAGTGATGCTGGTGAAACACCTGCTTCACCTTTGCTCGGATTATTGCAATCTTACAAAGAAGCATTAGCTAATAATGATGAAGTCAAAGTTGCTGAGTTAGAATCATCATTAAAATCCATCGAAGATGAGAAAGTAGGTCTTGAAGTGAAAGTAGCTTCTTTATCTGAAGAGTTTTCGATAGAAAGAGATCGGGTTCTAAGGATTAGTTCAGACTTTGACAATTTTCGGAAGAGGACTGAGAGAGATCGCCTTTCACTGGTCTCTAATGCTCAGGGGGAAGTTGTGGAGAGTTTGTTGCCTGTATTGGATAATTTTGAGAGAGCAAAATCTCAGATAAAGGTGGAGACAGAAGCAGAGGAGAAAATAAACAACAGTTATCAGAGCATATACAAACAGTTCATTGAAATTCTAACCTCACTTGGAGTTGAACCAGTGGAGACAGTTGGAAAACCCTTTGATCCATTGGCACACAAACCAGTTGGCTCGAAATTCAATCGAGTACTTGATGAACTTTTTCAAACACTTTATCAAGTTTGTTCAGGTTTCCTGAAGACCTGGACACGCTTTTAA 879 0.4494 MATVLRTSTFRPPPPLRTSASPSKSPKPSFVAVGQSNTCRRRRPSFLTSLRFPSIPSLRFVKFVPFAFDGDSEAPQVQEPEVQVLDSSDGAIGAEDSTCDNEFSDAGETPASPLLGLLQSYKEALANNDEVKVAELESSLKSIEDEKVGLEVKVASLSEEFSIERDRVLRISSDFDNFRKRTERDRLSLVSNAQGEVVESLLPVLDNFERAKSQIKVETEAEEKINNSYQSIYKQFIEILTSLGVEPVETVGKPFDPLAHKPVGSKFNRVLDELFQTLYQVCSGFLKTWTRF. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03673 292 Coils Coil 126 160 - -
Seca2g03673 292 PANTHER GRPE PROTEIN 26 261 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Seca2g03673 292 Pfam GrpE 139 264 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Seca2g03673 292 MobiDBLite consensus disorder prediction 1 38 - -
Seca2g03673 292 Gene3D - 119 242 IPR013805 -
Seca2g03673 292 MobiDBLite consensus disorder prediction 22 38 - -
Seca2g03673 292 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 150 244 IPR013805 -
Seca2g03673 292 PRINTS GrpE protein signature 169 185 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Seca2g03673 292 PRINTS GrpE protein signature 252 267 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Seca2g03673 292 PRINTS GrpE protein signature 197 212 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Seca2g03673 292 FunFam GrpE protein homolog 126 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03673 Seca-Chr2 113658617 113666006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03673 K03687 - gmx:100820521 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03673 2 113658617 113666006 Seca2g03673 2 113658617 113666006 ECH