Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03656 ATGGGCGGCGCCGCCCCAAGGTTCCTCTTCCTTCTCACCACTCCCTTCCCTCTCCTCCGTCACAACCTCCGTCTCCTCTCTCCCTCTTTCTCCCATTTCCACCGTCTCTCTTCTTCCTTTTCCTCTTCCTCTTCCTCTTCTCTCACTCCCAAACTCAAACTCAGAGCCTCCCAACCCCAACAGCACTTTCACACCCAACCTCAAACAACAACACCTTCACACCCCTGGCCTGAATGTTCCAGATTTCTCTCCCTTATCTCCTCCGTCGGCTACTCTGCCACCATTCCCGACGAAGGCTTCCCGGCGACTGGGGAGTTATCGCAGCGCGAGGCCACTGCCTGTTTGGCTTTCGCTCGCGACCGTCCCAACCTTCTGCTGTTGCTTTCCATGAGAGATATTGCGGTTGTGGTTGAACATGGCACCCCCTTTCTGTTCCCTGATGCTGAGGATTCTGTCAGGAAGATGAAGTCTTTTATATCCAACGGTGACGCCACTGCCTTGGACACTGATAGAGCAAATATGGTTGATCTAATGAAGTTTATGCTGAGTTATGCAAGTAACCCATTGGTCTCTCCAGAAAGAAACAGTCTCTATAACAGAGAACTTGTTGAATCATCTGTCAGAAATCTCTTTGGTGAGCTTTTCAAGCTGAGTTATAGTGCACCTGGACCTAACTCTTTTGATTCAGTGCAAAATCAAATGCCTGGTAGATTTGGGCAGACAATGCCTCGTGGACAAAATATTGAAATGAAAAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTTGCAAGAAATGTTAAATGTCTTGATTGTGAGGAAGCAAGGCCAAAAAGACAAGTAACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTGCAAGCGGCCTGGACAAATATCTTTGGGTGCCACCAATACCATGTCAAATATGGGGTATGGTAATGGAAACAATTCAAATACTTCAGATGTTGATACTAGATTAGCTGCTAATGAAGAGAAGGCACAGCGTTGGTTTAGCAAGGTTTCTCAACTAGACAGCAATGCTGATATTAACAGCGTGATAGCAGATGAAGATTTTCCAGAAATAATGCCATTAAGGAAAGGAGTTAATAGATTTGTTGTCAGCTCAAGGAAAACTCCATTGGAGAGGAGGTTGGCCAATGCTCAATACAAGAGAAACTTGGGAAATAATGGCACTCCCGGGGTTGAGGATTTTAAAGCTGGGGAGTCAACCAAGCCCCATGATACTCTAGATGACATTCTAGGTCGTTCAGCTGACCTTCCTCAATCTGACAATAAAAACATTGTTGCTGAACAAAATACCAGTAGAGAGAACCTTCCTTCAACTTCTAGCAATGCTTCACATTTCAATGATGTGAAAGGGAGCAATACTAGTACTGTGCCTCCCTTTCCATTGTCCGCAGATATGACTGCCCAAAAGTCTGAGAACTTTCAACCAGAGGAGAGCCAAAAATTGGCATTAGACACTGGTGTTGGGTATGCCAGTTCTGGTGGCAGTCCACAGATTTCTAATAATTCTACAAGCGAAAATGCCATCAAGGATAACGAGAAAGAGCAAGCTGAAAAATCTGAGAGGTGGTTTAGAAAAGTTGCTGAGCTGCATGATGTTCCAGATTTAACAAGTGCAATATCTGATGAGGATTTCCCTGAAATAATGCCCATGCGTAAAGGAGAAAATCGATTTGTTGTTAGTAAAAAAAAAGATCGCTCCTTGACAACACCAGCATATAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACCAACTTTGTCCCCTTTGTCCCCTTCCCCCCAGATTACTTTGCCAAAAAGGATAAGCAACAGGCAGATGGGACAGATTCAACTGATAGGTCTAATGTTGAATCATCTTCTATATCTCAGGTGACAGAGATGTCAGATGATGCTAGAACTAGACCTGGACAGAGTCCAAAACCTTCTGAACAGAGCTCAAATAACAACAATCATGTGGGTTCTACTTATGGGGCAACAAGCAGTGGAAATTCAAGCCAGAGTTTCAATCAAGATCATGTGCCAAACTTGACAGGGAGTTCATCCCCAGGCTCAGCATCTGAGAATCAGAGTGTTAGAGCAGAATGGACAGGAAAGAGTTTGGAGGGGTCAGCTGTGAGGGAACCAGATCCTTTGGATATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGCCGTGTTGCACAAATTAAGGATATCTCTGAGCTTAGTCAGATACCAGATGAAGATTTTCCTTCAATAATGCCTATGCGCAAAGGGGTGAACAGATTTGTTGTGAGCAAGAGGAAAACACCTTTGGAAAGGAGATTGACATCTCAGCAGTATCGAAGAAATCTTCCAATTAGCAATTGTGCTCGAGTGCTCAACTCATTCATCTGTTTCATTGTTTTCCTCATATTTGATCTTCTTGATGCTGTTTTCTGTGTCATCTATAGATTCCTTGATGAGCGCATTGAAGAGGAACCCTCCCCTTGTTGCTGCTACAAATGGGAAAGGCAGAAGAAGAAGAAGAATGATGAAGATGAAGATGATGGGCCACTGAATCGTTGGTCTGATTGTGGATGTGAGTCTTGCCTTTCATGGGTGAATGGTGGTGACTATAAACTTCATTTTGTTGTGAGGGAGCCCTTAATGGAGACAGTGTTTCCATATTTTTCTGAAAATGTAAATCATAACTATAGATTGATTGCAATAGACCTGCTGGGATTTGGCAAGAGCCCAAAACCAAGAGATTGCTTGTACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGATTCAACCATTGCAATTAAGTACTTTCCATTTGGTTGCACACTCTATGGGTTGCATAATTGCATTGGCTTTGGCTGCAAAGTACCCCAATTGTGTAAAATCAATCACCCTTGTGGCTCCTGTAAGTACCCAACCTAGATATCACTTTCAAGTTTTAACTTTTAAGAATTGA 2988 0.4364 MGGAAPRFLFLLTTPFPLLRHNLRLLSPSFSHFHRLSSSFSSSSSSSLTPKLKLRASQPQQHFHTQPQTTTPSHPWPECSRFLSLISSVGYSATIPDEGFPATGELSQREATACLAFARDRPNLLLLLSMRDIAVVVEHGTPFLFPDAEDSVRKMKSFISNGDATALDTDRANMVDLMKFMLSYASNPLVSPERNSLYNRELVESSVRNLFGELFKLSYSAPGPNSFDSVQNQMPGRFGQTMPRGQNIEMKRGDWICPRCNFMNFARNVKCLDCEEARPKRQVTGGEWECPQCDCKRPGQISLGATNTMSNMGYGNGNNSNTSDVDTRLAANEEKAQRWFSKVSQLDSNADINSVIADEDFPEIMPLRKGVNRFVVSSRKTPLERRLANAQYKRNLGNNGTPGVEDFKAGESTKPHDTLDDILGRSADLPQSDNKNIVAEQNTSRENLPSTSSNASHFNDVKGSNTSTVPPFPLSADMTAQKSENFQPEESQKLALDTGVGYASSGGSPQISNNSTSENAIKDNEKEQAEKSERWFRKVAELHDVPDLTSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTTPAYKRRLAMEQSGNTNFVPFVPFPPDYFAKKDKQQADGTDSTDRSNVESSSISQVTEMSDDARTRPGQSPKPSEQSSNNNNHVGSTYGATSSGNSSQSFNQDHVPNLTGSSSPGSASENQSVRAEWTGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPISNCARVLNSFICFIVFLIFDLLDAVFCVIYRFLDERIEEEPSPCCCYKWERQKKKKNDEDEDDGPLNRWSDCGCESCLSWVNGGDYKLHFVVREPLMETVFPYFSENVNHNYRLIAIDLLGFGKSPKPRDCLYTLKDHVEMIEKSVIQPLQLSTFHLVAHSMGCIIALALAAKYPNCVKSITLVAPVSTQPRYHFQVLTFKN. 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03656 995 MobiDBLite consensus disorder prediction 394 476 - -
Seca2g03656 995 MobiDBLite consensus disorder prediction 429 476 - -
Seca2g03656 995 Gene3D alpha/beta hydrolase 889 993 IPR029058 -
Seca2g03656 995 MobiDBLite consensus disorder prediction 55 75 - -
Seca2g03656 995 MobiDBLite consensus disorder prediction 610 726 - -
Seca2g03656 995 ProSiteProfiles Zinc finger RanBP2 type profile. 251 280 IPR001876 -
Seca2g03656 995 MobiDBLite consensus disorder prediction 622 709 - -
Seca2g03656 995 PRINTS Alpha/beta hydrolase fold signature 964 977 IPR000073 -
Seca2g03656 995 PRINTS Alpha/beta hydrolase fold signature 950 963 IPR000073 -
Seca2g03656 995 PRINTS Alpha/beta hydrolase fold signature 904 919 IPR000073 -
Seca2g03656 995 Gene3D - 243 283 - -
Seca2g03656 995 SMART zf_4 253 277 IPR001876 -
Seca2g03656 995 MobiDBLite consensus disorder prediction 503 519 - -
Seca2g03656 995 Pfam Zn-finger in Ran binding protein and others 252 279 IPR001876 -
Seca2g03656 995 SUPERFAMILY alpha/beta-Hydrolases 891 987 IPR029058 -
Seca2g03656 995 Pfam alpha/beta hydrolase fold 894 980 IPR000073 -
Seca2g03656 995 MobiDBLite consensus disorder prediction 409 423 - -
Seca2g03656 995 SUPERFAMILY Ran binding protein zinc finger-like 245 281 IPR036443 -
Seca2g03656 995 MobiDBLite consensus disorder prediction 499 529 - -
Seca2g03656 995 ProSitePatterns Zinc finger RanBP2-type signature. 255 274 IPR001876 -
Seca2g03656 995 PANTHER ZINC FINGER PROTEIN 41 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03656 Seca-Chr2 113316529 113325560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03656 800 979 Acyl Lipid Metabolism Gene Families AT5G17780 42.339 2.18e-50 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03656 - - gmx:100775801 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03656 2 113316529 113325560 Seca2g03656 2 113316529 113325560 ECH