Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03655 ATGCCTAAAAGTTCTCTACTGCAGGAGGGTGAATTCCACAACCTGGCTGATTCCACGATACATAGCCTACAAGAGAAACTTGAGGACTATGGAGACTCTGTTGAACTTGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTGTAAAACTTGGGGATTTGGGCACCTATGTATTGAACAAACAAACACCCAATAGACAACTTTGGCTGTCTTCTCCTGTGAGTGGACCATCAAGGTTTGATTGGGATCAAGATACTAAAGCTTGGATTTATAGACGGACCAAAGCAAACTTGTATAAAATTTTAGAAGATGAGTTGGAACAGTTGTGTGGCAAACCTATTGTTCTTTCCTAA 357 0.4006 MPKSSLLQEGEFHNLADSTIHSLQEKLEDYGDSVELDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQDTKAWIYRRTKANLYKILEDELEQLCGKPIVLS. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03655 118 PRINTS Frataxin signature 7 25 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 PRINTS Frataxin signature 60 75 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 PRINTS Frataxin signature 45 60 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 SMART Frataxin_Cyay_2 7 118 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 SUPERFAMILY Frataxin/Nqo15-like 5 115 IPR036524 GO:0008199|GO:0016226
Seca2g03655 118 NCBIfam frataxin 11 108 IPR017789 GO:0004322|GO:0005739|GO:0006879|GO:0018283
Seca2g03655 118 FunFam Frataxin, mitochondrial 1 118 - -
Seca2g03655 118 ProSitePatterns Frataxin family signature. 59 73 IPR020895 -
Seca2g03655 118 PANTHER FRATAXIN 3 117 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 NCBIfam iron donor protein CyaY 9 116 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 ProSiteProfiles Frataxin family profile. 7 115 IPR002908 GO:0008199|GO:0016226
Seca2g03655 118 Gene3D Frataxin/CyaY 1 118 IPR036524 GO:0008199|GO:0016226
Seca2g03655 118 CDD Frataxin 7 115 - -
Seca2g03655 118 Pfam Frataxin-like domain 8 114 IPR002908 GO:0008199|GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03655 Seca-Chr2 113285086 113287813 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03655 K19054 - gmx:100811801 227.639