Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03606 ATGTACAACTCGGGAGGAGGAAGCAGGAACATGAGCATTCTTGCGTCGCGTACGAGCTCACGGTCGGTGACAGAAACGGTGAACGGGTCTCACAAATTCGTGATAAAGGGATACTCTCTTGCGAAGGGTATGGGAGTGGGAAAACACATCGCTAGTGAGACTTTCACCGTCGGAGGATACCAGTGGGCCATCTACTTCTATCCCGACGGCAAGAACCCTGAAGACAACTCCGCCTACGTCTCCGTCTTCATCGCTCTTGCCTCTGAGGGCACCGACGTTCGTGCACTCTTTGAACTCACCTTGCTTGATCAGAGCGCCAATGGCAAGCACAAGGTCCATAGTCACTTTGATCGTTCACTCGAGAGCGGTCCCTACACTCTCAAGTACCGTGGCAGCATGTGGGGGTATAAGCGTTTTTTCAAACGTGCTCAACTCGAGGCCTCAACCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGTGTGGTGGTGTCGTCCATAGATTGCTCTAAATTGAACACCATACAGGTTCCTGACTCTGATATTGGATCGCATTTTGGCATGCTGTTAGAGAATGAGGAAGGATCTGATGTTACTTTCTCAGTTGGTGGAGAGAGATTTCATGCCCATAAGCTTGTTTTGGCTGCTCGGTCAACTGCATTTGAAACTGAGTTTTTCAATGGGATGGAGGAAGATGGTAGTGACATAGTTGTTACTGACATGGAACCTAAGGTTTTCAAGGCTTTGCTTCATTTTATTTATAAAGACACTCTTATAGAAGATGAAGAGCTCTACATGTCGCGTTCATCATTCCTGCCTTCAGTATCTGAAACATTTGCAGCAAAATTGTTAGCTGCTGCTGAAAAGTATGGTTTGCCGAGACTTAAGCTGATGTGCGAGTCTGTAATTTGCAAAGACATATCTATAGATTCTGTTGGCTATATTCTGGCTCTTGCTGATCGTTATCATGCTACAGAGCTGAAGTCCATCTGTCTACAATTTTTTGCTGAAAACCTTGTCGCTGTGATGCATTCTGATGGTTATCAGTATCTTAAGGAAAACTGTCCATTGCTGCAATCAGAACTGCTAAAGACAGTGGCAGGATGTGAGGAGGAATTTAGTGGAGAAGGAAAATGTCGAAGTGTGTGGGCCCAATTTTCTGATGGTGGTGATACCAATGATAGGAGTGTAAGACAACAAACCTGGGAAAATGGAGTTGAAAGAAGTCAAAGCTTATGGGTTCACCTTTCTGATGGTGCTAACAACAACGATAGGAGTCCAGGTCAAGAAGCTTGA 1302 0.4539 MYNSGGGSRNMSILASRTSSRSVTETVNGSHKFVIKGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQSANGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNTIQVPDSDIGSHFGMLLENEEGSDVTFSVGGERFHAHKLVLAARSTAFETEFFNGMEEDGSDIVVTDMEPKVFKALLHFIYKDTLIEDEELYMSRSSFLPSVSETFAAKLLAAAEKYGLPRLKLMCESVICKDISIDSVGYILALADRYHATELKSICLQFFAENLVAVMHSDGYQYLKENCPLLQSELLKTVAGCEEEFSGEGKCRSVWAQFSDGGDTNDRSVRQQTWENGVERSQSLWVHLSDGANNNDRSPGQEA. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03606 433 ProSiteProfiles MATH/TRAF domain profile. 28 162 IPR002083 GO:0005515
Seca2g03606 433 SUPERFAMILY POZ domain 176 308 IPR011333 -
Seca2g03606 433 SMART math_3 33 145 IPR002083 GO:0005515
Seca2g03606 433 CDD MATH 29 162 IPR002083 GO:0005515
Seca2g03606 433 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 18 365 IPR045005 GO:0016567
Seca2g03606 433 SUPERFAMILY TRAF domain-like 25 164 - -
Seca2g03606 433 FunFam BTB/POZ and MATH domain-containing protein 4 27 166 - -
Seca2g03606 433 SMART BTB_4 198 309 IPR000210 GO:0005515
Seca2g03606 433 ProSiteProfiles BTB domain profile. 198 264 IPR000210 GO:0005515
Seca2g03606 433 CDD BTB_POZ_BPM_plant 184 306 - -
Seca2g03606 433 FunFam BTB-POZ and math domain 1 174 303 - -
Seca2g03606 433 Pfam BTB/POZ domain 190 307 IPR000210 GO:0005515
Seca2g03606 433 Gene3D - 308 382 - -
Seca2g03606 433 Gene3D Potassium Channel Kv1.1; Chain A 174 303 IPR011333 -
Seca2g03606 433 CDD BACK_AtBPM-like 306 367 IPR034090 -
Seca2g03606 433 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 27 166 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03606 Seca-Chr2 111590770 111600548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03606 K10523 - gmx:100809683 811.216