Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03604 ATGTTCCCCCACCGCCACATACTCACCAGAGCCTCCCTGCACCACCGCCACTTCTCCCACTCTGCCGCCGCAGCCGCCATCATCCACCCTCCCGAGCCGGAGCCGCTGACATACCTGGAAGGTTTTCCGAAGCCGGACCCCAAGTACGACGAGACGATCCTTGCGATTCCCCGCAGCGATTCGGGGAAGAACATCTCTGCGAAGGAGAGGAAGGCCGGGCGCGTGCCGAGCATCGTGTTCGAGCAGGAAGACGGCCAGCACGGCGGCAACAAGCGCCTCATCTCCGTCCGCACTGACCAGATCAGGAAGCTCGTCAACCACCTCGGCCGCTCCTTCTTCCTCTCCCGCCTCTTCAACCTCCACGTCCTCTCCCACTTCGACTCTGATGATATCGTCGAAAACGTTCGCGTTTTGCCCCGCAGGGTTCATTTGAAAGCTGGCACAGACGCACCTTTAAATGTCACCTTTATAAGGGCTCCATCACATGCTTTGTTGAAAGTTGATGTTCCTCTTGTATTCAGAGGAGAAGATGTATCCCCTGGACTGAAGAAAGGTGCCTCTTTGAATACCATCAAAAGGACTGTTAAGTACCTATGCCCTGCAGACATTATTCCCCCATATATTGACGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGTTGGTCATGGGTGATCTCAAAGTTCACCCTGCATTAAAACTTCTCCAGTCAAAAGATGAACCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAACAACAAAGGAAATCTAAGTAA 777 0.5277 MFPHRHILTRASLHHRHFSHSAAAAAIIHPPEPEPLTYLEGFPKPDPKYDETILAIPRSDSGKNISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFNLHVLSHFDSDDIVENVRVLPRRVHLKAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIMGQRVSEQQRKSK. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03604 258 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 27 253 - -
Seca2g03604 258 Gene3D Ribosomal Protein L25; Chain P 52 159 IPR020056 -
Seca2g03604 258 FunFam 50S ribosomal protein L25 164 254 - -
Seca2g03604 258 FunFam 50S ribosomal protein L25 53 159 - -
Seca2g03604 258 Pfam Ribosomal protein TL5, C-terminal domain 165 247 IPR020057 -
Seca2g03604 258 Pfam Ribosomal L25p family 55 156 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Seca2g03604 258 SUPERFAMILY Ribosomal protein L25-like 52 254 IPR011035 GO:0006412
Seca2g03604 258 Gene3D Ribosomal protein L25, beta domain 163 255 IPR037121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03604 Seca-Chr2 111532659 111536043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03604 K02897 - gmx:100809143 418.698